| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3447 |
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| Symbol | |
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| ID | 3624884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 4417461 |
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| End bp | 4421093 |
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| Gene Length | 3633 bp |
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| Protein Length | 1210 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637702276 |
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| Product | hypothetical protein |
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| Protein accession | YP_306900 |
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| Protein GI | 73670885 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00320271 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0786508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATAA AAAATGGAGG ACTGGAAGTC ATTAAAAATA GCGATTTACT CGAGAAAGCA
GAAAAAATAC CAGAAAGATG TAAAGAAATA ATTATAGAGG AGCTTTCTCC AACAACTCCT
AATATTTTCC TGAGACTAGG AAAAGAAGGA ACAGTTCTCT GTGCAAACAA GGCAGCTAAT
GCTCTTCTCA AATACTGGGA TATAAAAGAA GGGGAAAAGG TTCCTCAGGA GTTAAGACAC
AATATAAGAA GAGTTCTCAC ACAGGAAACT CCGGAAAATC TTGAGATTCA GGCCGGAAAA
ACAACATATG TTGCAGTACT CTACCCTTTT CCGGAAAACA AGTATGTAAA TCTTGAGGGA
TTTAACATAA GTCTCAGACT CCTTACCGAA GAAAAACTTA GTAAAAAGGA AAAACAATAC
CTGTCCCTTA GTAACCTCAG CAGGTTATCC ATAACATGTA AAAACGTTCA GGCGATTCTG
GAAGAAAGCG CTCTGATTAT TGCTAAGGGC CTTGATACAG AATTTACCAG GATTCTGGAA
CTCAAGCTTG ATGGAACCTT CATTATGAGG GCAGGATATG GCTGGAAAGG CGAAGCCATG
GACAGTGTTA TCATAAAAGA AAAGGATCAG GCAGAATATA CCCTTGTTTT GGGAAGACCG
ATTATCCAGG AAGGTATCGA AAACGAAACC CGCTTTGAAT GCATTGAATT TCTCAGGCAA
TATGGCATAG CCAGCGGAGT AACAGTCCTG ATAGGAAGTA TAAATAAGCC TTTTGTGGTA
GTGGAAGTTT ACAGCCGAGA AAAGAAAGAA TTCACTGAAG ATGATATATA TTTCCTGGAT
TCTGCCGCTT TTTTGTTGTC TGAGATAATA AAACACCTGC ATGCCGAGGA AGAACTTCAG
ATTCATCAGC AAGAACTGGA AGAACTTGTC GAAAAAAAGA CCCTTGCGTA CATGGAAGCA
AATGAGAAAC TTGTACATGA AGTAATAGAA AGAAGAAAAA TTGAGAATAA ACTTCAGAAC
AATGTGCAGT TTCTGGAAAC TCTGCTTGAT AATATCCCAA GCCCTGTTTT CCAGAGGGAT
CTGAATGAAA CATATGTAAA CTGTAATGAG AGCTTCGCCA GGCAGATTAT GGGACTTCCC
AAGGAAGAGG TTATAGGAAG TTCTTTCCTT GAGTTTCACA AAAGAGTTCC AAAAGAGCTT
GCAGAAATAT ATCTTAAGGA TGAAACGAGC CTTATTGAAG AAAAGGGAAG CAACTATTAC
GAAACAAAGG TGATCTGTGC TGACGGTGTG CACAGGGATT TCCTTTTCCA CAAGACCACC
TATCAGGACA GATCAGGGAA AGTAGCCGGT ATTGTCGGAA TAATGCATGA TATAACTCAG
CGTAAAGCAG CTGAAAAAAC CTTCAGGAAA AGTGAAGAGA GATATCGGAT CGCTGCCGAG
CAGACCGGGC AGCTTGTTTA CGATTATGAT CTCGATTCAG GGAAGATTGA CTGGGCAGGA
GCCATATCAA AGCTTACGGG TTACAGTTCT GAGGATTTCA AACAGGTAGA CATCAAAGAC
TGGATCACAC GTATCCATGA AGACGATCAG GAAAGAGCAT GGAAAAACCA TCAGCACTGT
ATGAAAACCG GGGGAAAATA TCTTGAAGAA TACAGGTTCA AAAAGAAGGA CGGGAGTTAC
TTCCATGCTG AAGACAGCGG GATTTACTTT TTAGGTGAAA AAGGTCAAAC ATACAGGGCT
GTCGGAGTAA TAAAAGATAT AACTGAAAGA AAACTTGCCG GTGAAGTTCT TGAGATAAAT
GAGGAACGTT ATAGGGCAGT TGCAGTACAG ACCGGGCAGC TCATCTATGA TTATGATGTG
AAAAGTAATT GCAGCTCGTG GGTAGGCGCA ATTGAGGAAC TTACAGGATA TAGCTTTGAA
GAGTTTCAGG GTCTCACTCC TGAACTCTGG GCTGATCACG TCCATCCTGA AGACAGGAAA
AAAGCTGGAA AAGCCCATGA AAGTTGTATG AATAATGGAG AAAAATACAT TGAAGAATAC
CGATTCCGTA GAAAGGATGG TAACTATTTT CCTGTAGAAG ACAGCGGCGT TTACCTGAAA
GATGAAAGCA AGGGAATATA CAGGGTTCTT GGGGTCATTA AAGACATTAC AGAGAGAAAG
AAGGCAACTG AAAGAGTCCA GAAAAGTGAG GAAAGGTATA GGATTGTTAC AGAACAGACA
GGCCAGATAG TATACGATTA TGATAGGCTC ACAGGTAAAA TAGAATGGTC GGGAGCCATT
AAAGAGCTTA CTCAGTATAG CCTGGAAGAG TTCCAGAATT TTAACATGAA GGCCTGGGAA
GTACATATTC ATCCCGAAGA TCGCAAAGAG ATAATTGAAC AGCTTGAAAA ATACAGAGAG
AGAGGAAATA GATTCGTTAT CGAGTATAGA TTCCAAAGGA AAGACGGAAC ATATCTGTAT
TTTGAAGACA GCAGGATTTT CCTGAAAGAT GGTCAGGGAC ACTCTTACAG AGATATCGGG
GTAATGAAAG ATATTACAGG GCTAAAACTT GCATCGAAAA AACTGAAAGA AAGTGAAGAG
CGGTACAGAT TCTTTATGAA AAATTATAGG GGTATAGCCT TCCAGGGAAA TCTGGATTTC
AAACTCATTC TTTTGGAAGG AAGTGTAGAG GAAATTACAG GATATCGGAG AGAAGATTTC
ATCTCAGGAA AAGTAAACTG GCGCCAGATT GTTCTTCCTG AAGACTGGGA AAAACTCGTT
AAAAGTAATA AAAGATTAAA GAATGATGCA CTACTTTTCA TAGAGCATGA ATATCGTATA
AGGCACAGGG ATGGAAAAAT AAAATGGGTT CGTGAGATTG TCCAGAATAT TTCGGACCCT
GCAGGCAAGA AAAGAATCCT GCATGGTGCG GTTTATGATA TAACCGGGCA AAAAGAAGCT
GAAGAATCTC TGAGGAAAAT AGAAGAAATC CGTAAAAAAG AAATCCATCA CCGCATAAAG
AACAATCTTC AGGTTATTTC CAGCCTTCTG GAACTCCAGG CTGAAAAATT CAGCGAAAAG
GAAGTACTTG AAGCTTTCCG TGAAAGCCAG AATCGGGTTG CCACCATGGC TATAATCCAT
GAAGAGTTGT ACAGGTCAAG AAATAGCGAA GTCCTCGATT TTTCGGAATA TCTTCAAAAA
TTGACTGCAG ATCTTCTTCG CTCATACAGT GTCGGAGGCG ATGTAAGGAT GCAACTGGAT
GTTGAAGAAA CCTTTATTGG AATGGACACG GCAGTCCCTC TGGGAATAAT TATTAATGAG
CTTGTATCCA ATTCCTTGAA ACATGCTTTT CCTCAGGACA GAAAAGGAGA AATCCGAATA
AAACTTTGCA AGGCTGAAGA GAATGTAAAG AATAAAAGTA TAAGTAATAT CACTAATAAT
ATTGGTGCAA AGAGCTCAAT TAATAAAAGT AGTCAATATT CACTGGTAGT TTCGGACAAT
GGGTTGGGTT TTCCGGAAGG TCTTGATTTC AGAAACACTA GTTCTTTGGG TCTACAGCTT
GTAAACATTC TTGTTGAACA ACTGGAAGGC ACAATTGAAC TTCAAAAAGA TTCAGGGACC
ACCTTCAAAA TATTATTTAG GGAAAACAAC TGA
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| Protein sequence | MQIKNGGLEV IKNSDLLEKA EKIPERCKEI IIEELSPTTP NIFLRLGKEG TVLCANKAAN
ALLKYWDIKE GEKVPQELRH NIRRVLTQET PENLEIQAGK TTYVAVLYPF PENKYVNLEG
FNISLRLLTE EKLSKKEKQY LSLSNLSRLS ITCKNVQAIL EESALIIAKG LDTEFTRILE
LKLDGTFIMR AGYGWKGEAM DSVIIKEKDQ AEYTLVLGRP IIQEGIENET RFECIEFLRQ
YGIASGVTVL IGSINKPFVV VEVYSREKKE FTEDDIYFLD SAAFLLSEII KHLHAEEELQ
IHQQELEELV EKKTLAYMEA NEKLVHEVIE RRKIENKLQN NVQFLETLLD NIPSPVFQRD
LNETYVNCNE SFARQIMGLP KEEVIGSSFL EFHKRVPKEL AEIYLKDETS LIEEKGSNYY
ETKVICADGV HRDFLFHKTT YQDRSGKVAG IVGIMHDITQ RKAAEKTFRK SEERYRIAAE
QTGQLVYDYD LDSGKIDWAG AISKLTGYSS EDFKQVDIKD WITRIHEDDQ ERAWKNHQHC
MKTGGKYLEE YRFKKKDGSY FHAEDSGIYF LGEKGQTYRA VGVIKDITER KLAGEVLEIN
EERYRAVAVQ TGQLIYDYDV KSNCSSWVGA IEELTGYSFE EFQGLTPELW ADHVHPEDRK
KAGKAHESCM NNGEKYIEEY RFRRKDGNYF PVEDSGVYLK DESKGIYRVL GVIKDITERK
KATERVQKSE ERYRIVTEQT GQIVYDYDRL TGKIEWSGAI KELTQYSLEE FQNFNMKAWE
VHIHPEDRKE IIEQLEKYRE RGNRFVIEYR FQRKDGTYLY FEDSRIFLKD GQGHSYRDIG
VMKDITGLKL ASKKLKESEE RYRFFMKNYR GIAFQGNLDF KLILLEGSVE EITGYRREDF
ISGKVNWRQI VLPEDWEKLV KSNKRLKNDA LLFIEHEYRI RHRDGKIKWV REIVQNISDP
AGKKRILHGA VYDITGQKEA EESLRKIEEI RKKEIHHRIK NNLQVISSLL ELQAEKFSEK
EVLEAFRESQ NRVATMAIIH EELYRSRNSE VLDFSEYLQK LTADLLRSYS VGGDVRMQLD
VEETFIGMDT AVPLGIIINE LVSNSLKHAF PQDRKGEIRI KLCKAEENVK NKSISNITNN
IGAKSSINKS SQYSLVVSDN GLGFPEGLDF RNTSSLGLQL VNILVEQLEG TIELQKDSGT
TFKILFRENN
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