| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3418 |
|---|
| Symbol | |
|---|
| ID | 3624705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 4381752 |
|---|
| End bp | 4382378 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637702246 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_306871 |
|---|
| Protein GI | 73670856 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1920] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03552] 2-phospho-L-lactate guanylyltransferase CofC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.987927 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.302844 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCTG TAATCCCCTA TAAAAAATCC AGTGCAAAAT CAAGATTGTC CCCTGTCCTG
ACTCGGGAAG AGAGAGAAGA GTTTGTGGAC CTGATGTTGA ATCAGGTGAT AGATACACTT
AAGGAAGCCG GAGTGGGAAC AATCGACATT CTTAGTCCTT CTATGTACGG GCTTGAGAAT
ATGACGAAAG CCAATGTACT TCTGGACAAA AATGACCTGA ACGAAGCCCT TAACGGGTAC
CTTGAGCAGG CTGAGGAGCC GGTTATTATT GTTATGGCTG ATCTTCCCCT TTTATCTCCA
GACCATGTTA AAGGGATAAC TTCAACAAAA GAAGACGTTT GTATCGTCCC GGGAAAAGGT
GGAGGTACAA ATGCACTATT TATCAAAAAC CCTTCCTGCT ACAGAGTCAG GTACTATGGC
TCGAGTTTTC TGACACACTG CTCGATTGCA GAAAAAACAG GACAGAGTGT TGAGGTATAT
GATTCTTTTT TTGCGGGTAC TGATATTGAT GAGCCCGAAG ATCTGGTTGA ACTGCTTATA
CATGGAAGCG GAGCTGCAAA AGAATATATC AGCAAAAAGT TCAGACTTGA GATGAGCAGA
GGAAGGGTCG GACTGGTTCA TATTTAG
|
|---|
| Protein sequence | MKAVIPYKKS SAKSRLSPVL TREEREEFVD LMLNQVIDTL KEAGVGTIDI LSPSMYGLEN
MTKANVLLDK NDLNEALNGY LEQAEEPVII VMADLPLLSP DHVKGITSTK EDVCIVPGKG
GGTNALFIKN PSCYRVRYYG SSFLTHCSIA EKTGQSVEVY DSFFAGTDID EPEDLVELLI
HGSGAAKEYI SKKFRLEMSR GRVGLVHI
|
|---|
| |