Gene Mbar_A3394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3394 
Symbol 
ID3624831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4352888 
End bp4353577 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content44% 
IMG OID637702222 
Productuncharacterized Fe-S protein 
Protein accessionYP_306847 
Protein GI73670832 
COG category[C] Energy production and conversion 
COG ID[COG1600] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.145168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.150282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAAAA TTGCTCTTAC AAAAAAGATA GAAGACACCG CTTTTAAAAT GAACGCGGAT 
TTTATTGGGA TTGCAGATGC AGCTTGCTTT GAAAACCCGG AATATACAGG AAACAAACCT
CAGGACGTGA TGGCAGGCGT TCAATCAGTT ATAGTTCTGG GAGTTGGCAT ACCAAGAGGA
GCTTTTGAGA CACTTCCAGC CGGGCGGGCA GAATATACCA ATACTCTTAT GGCAGCAACT
GCAACCCTTC GAATAGTCGC TTTTCAAATT GCAAAACTTA TTGAGAAGGA AGGATACAAA
GCAACTATTG TGCCTACAGA GGGAAGTGAG TTTGGATACT GGTATGCTGA CCGCGAGACA
CTTAAAGCAA ATCTGTCTAT CAAATATGCC GCATACCATG CAGGACTGGG AAATTTCGGC
ATGAATCACC TCCTTATTAC AAATGACTTC GGCCCCAGAG TTAGAATGAC CGCAATACTG
ACCGATGCCC CACTAGATAA AGAAGAAAAG GGTACCTTAC TACCGTTTAT CAACGAAAAA
TGCAGCAACT GCATGAAATG CATTGAAGTA TGCCCGGCTG GCGCTATCTC TCGGGATGGA
AAAATTGACA GGCAGAAGTG CGCACAGTAC ATGTTTAATG TACTGGGAGG TCTGCGTTGT
GGGCTCTGTG TTAAAGTCTG TCCACAGTAA
 
Protein sequence
MRKIALTKKI EDTAFKMNAD FIGIADAACF ENPEYTGNKP QDVMAGVQSV IVLGVGIPRG 
AFETLPAGRA EYTNTLMAAT ATLRIVAFQI AKLIEKEGYK ATIVPTEGSE FGYWYADRET
LKANLSIKYA AYHAGLGNFG MNHLLITNDF GPRVRMTAIL TDAPLDKEEK GTLLPFINEK
CSNCMKCIEV CPAGAISRDG KIDRQKCAQY MFNVLGGLRC GLCVKVCPQ