| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3389 |
|---|
| Symbol | |
|---|
| ID | 3624826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 4346607 |
|---|
| End bp | 4347254 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637702217 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_306842 |
|---|
| Protein GI | 73670827 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000102267 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0705776 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTATAA GGAATGTAAG AAATTTTGAT TTCATGGACG CAATTTACTA TGAAGCTCAT
AAAAATCTCT ATATAAACCT TACAAACCGC TGCAGTGCAG ACTGCGTCTT TTGCATCCGT
AATTTTGCAG ACGGGGTTTA CGGATATGAC CTGAGGCTTT CAAGAGAACC GACAACAGAG
GAAGTTATCG GAGCCCTTGA AGGACTGGAC CTTTCAAAAT ACAGAGAAAT CGTATTCACA
GGCCTTGGAG AGCCAACCAT CAGGCTTGAT GTGGTGCTAG CAGTAACCCG CTGGCTGAAA
AGCCGGAATA TTCGAGTAAG GCTAGATACT AATGGACAGG CAGCCCTGAT AAATCCGGGA
AGAGATGTAG TCTCAGAACT GAAAACCGCA GGGTTAGACT CTGTTTCCGT AAGTTTGAAT
GCCGAGTCCG AAGAAAAGTA TAACAAACTC TGCAGACCGA TTCATAAAAA TGCTTATTCT
GCAGTACTTG ATTTTGTTAA GAAAGCAAAG AAGGCAGGAA TCAGTACAAG GGTTACAGTA
GTTAATATAC CCGAAATTGA CCTGGAAAAA TGTAGAAAGC TTGCAGAGGA GCTTGATTCG
AGCTTCCACA TAAGGACTTT ATCCGAAGCT GCAAGCAAAG AAATCTGA
|
|---|
| Protein sequence | MVIRNVRNFD FMDAIYYEAH KNLYINLTNR CSADCVFCIR NFADGVYGYD LRLSREPTTE
EVIGALEGLD LSKYREIVFT GLGEPTIRLD VVLAVTRWLK SRNIRVRLDT NGQAALINPG
RDVVSELKTA GLDSVSVSLN AESEEKYNKL CRPIHKNAYS AVLDFVKKAK KAGISTRVTV
VNIPEIDLEK CRKLAEELDS SFHIRTLSEA ASKEI
|
|---|
| |