| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3384 |
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| Symbol | |
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| ID | 3624821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4343066 |
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| End bp | 4344841 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637702212 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_306837 |
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| Protein GI | 73670822 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00491] translation initiation factor aIF-2/yIF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000114381 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0283403 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACA AGAAAAATTT GAGGACTCCT ATAGTCTGCG TGATGGGGCA CGTCGACCAC
GGGAAAACGA CTCTACTGGA CAAGATCAGG GGTACTGCAA TTGTCAGTGG AGAAGCCGGC
GCTATCACCC AGCATATCGG GGCAACTGAA GTTCCAATAG ATGTAATTAT CAACAAGCTT
GGAGACCCAA GGCTTCGGGA TAGGTTCATA GTGCCAGGAC TGCTCTTTAT TGATACACCT
GGACATCATG CCTTTACAAC ACTAAGAAGC AGGGGAGGCG CTCTTGCCGA TCTTGCAATC
GTTGTAGTGG ATATAAACGA AGGTTTCAAA CCTCAGACCT ACGAAAGCCT GCAGATCTTA
AAGCGGTTCA AAACTCCTTT TGTTGTTGTT GCGAATAAGA TTGACAGGAT TGGCGGCTGG
GTTTCACAAA AAGACCTGCC TTTTGCGGTC ACTTTCAAAA AACAGTCTGA AGACGTCCAG
GCCCGGCTTG AGACAAAGCT CTACGAGGTA ATCGGAGAGT TATACAACCA GGGCTTTGCA
GCAGAACGGT ATGATAGGGT CACAAACTTC CAGAAAACCC TGGGTGTAGT GCCTGTAAGT
GCCATGACAG GCGAAGGAAT TCCTGATGTC CTGATGGTAC TTCTAGGTCT GGCTCAGAAA
TTCCTTGAAG CAAACCTGCA TTACAGTGCC AAAGGTCCCG GAGTCGGCAC TGTGCTTGAG
GTCAAGGAAG AAAAAGGGCT TGGTGCGACC CTGGATGTTA TCCTTTATGA CGGTACTCTG
AAAAAGGGCG ATACTGTTGT TATTGGAAGT CTGGGAAAAC CAATCCAGAC AAAGGTTCGT
GCTCTCTTAA AGCCAAGGGA ACTTTCTGAG ATGCGTTATG AGAGCAAGTT CAAGCAGGTA
AACAAGGTTA CTGCTGCAGT TGGAGTAAAG ATTTCAGCTC CAGGGCTCGA AGGTGCACTT
GCAGGTTCTC CAATAAGGGT TGCTAACGAA GATACTCTTG ACGAGATTGT AGACCAGATA
AAATCCGAGA TCGATGAAGT CAGGATTGAT ACTGGTGCGG TCGGAATTAT GATCAAAGCG
GATACGCTCG GCTCCCTTGA AGCTCTTGTC CATGAGTTCC AGAAAGATGA GGTCTCCATC
AGGAAAGCCG AAGTAGGAGA TATCTCACAC CGGGACGCAA TTGAGGCTTC GACAGTTGAA
GACCCACTTT ATTCGGTGAT TATAGGTTTC AATGTCAAAG TTCACCCTGA CGCCAGAGAT
TTCCTGCAGG AAAGCACTGT GAAGGTATTC ACAAGTGACG TGATTTACCG CCTGGTTGAA
GATTACCAGA AATATGTAAA AGAGCAGCAG GAGCAGGCTG AAAAGAGGAT TTTCGAAACA
ATAATCCGTC CGGGAAAATT CAAAATCCTT CCTGGCTGCA TATTCCGCCA GAGTAAACCC
GCAGTTGTCG GCATAAGAGT GCTTGGCGGA GTCGTGCGGA CAAATGCCGA TGTGATGCTT
GAGAACGGAA ACGTTGTAGG TAAGATCAAA GGCCTGCAGA TCGAAGGAGA GAATATCCCG
TCTGCAGGAG TAGGCAAAGA GGTTGCAATG GCAATTGAAG GTGCAACCGT AGGCAGGCAG
ATCAAAGAGG AGGACGTGCT CTACGTCAAC GTGCCTGAGA GGCATGCCAA AGTTCTTGAG
CACGAGATAT ACGATTCCCT TTCAACCGAT GAAAAGGAAA CTCTTGATAT TTTTCTTTCC
CTGAAAAGAA AAGATAATCC TTTCTGGGCA AAATAA
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| Protein sequence | MADKKNLRTP IVCVMGHVDH GKTTLLDKIR GTAIVSGEAG AITQHIGATE VPIDVIINKL
GDPRLRDRFI VPGLLFIDTP GHHAFTTLRS RGGALADLAI VVVDINEGFK PQTYESLQIL
KRFKTPFVVV ANKIDRIGGW VSQKDLPFAV TFKKQSEDVQ ARLETKLYEV IGELYNQGFA
AERYDRVTNF QKTLGVVPVS AMTGEGIPDV LMVLLGLAQK FLEANLHYSA KGPGVGTVLE
VKEEKGLGAT LDVILYDGTL KKGDTVVIGS LGKPIQTKVR ALLKPRELSE MRYESKFKQV
NKVTAAVGVK ISAPGLEGAL AGSPIRVANE DTLDEIVDQI KSEIDEVRID TGAVGIMIKA
DTLGSLEALV HEFQKDEVSI RKAEVGDISH RDAIEASTVE DPLYSVIIGF NVKVHPDARD
FLQESTVKVF TSDVIYRLVE DYQKYVKEQQ EQAEKRIFET IIRPGKFKIL PGCIFRQSKP
AVVGIRVLGG VVRTNADVML ENGNVVGKIK GLQIEGENIP SAGVGKEVAM AIEGATVGRQ
IKEEDVLYVN VPERHAKVLE HEIYDSLSTD EKETLDIFLS LKRKDNPFWA K
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