| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3335 |
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| Symbol | |
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| ID | 3626114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4281162 |
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| End bp | 4282553 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637702168 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_306793 |
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| Protein GI | 73670778 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.887003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0261397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGG GAAAAATTTT AAAAATTGCT TTTAGTATGG TCAAAGCCAA TAAGCTGAGA
AGCTGGCTGA CTATAATAGG GATAATAATC GGTATTGCCT CGGTAATGGC GATTGTCACT
ACAGGGGAAT ATTTCGAGAA AGAGGTAACT GAAACTCTGG AAGGTTTCGG GGGTGATATC
ATCACAATCG TAGCCTCAAC TCCCTTCCAG GTAACCGACG AAGAATTCGT AGTGGCGAGT
TCAGAAGATA CAGACGGAAG TTCAGATGTT TCGGGAGATA ATTTCGAGAC AAATACCGAG
ACCGAAGAAA ATGAAGAGGA AACTCAGGAC AGTACATCTA ACTCTCTCGA GTTTGAGCAG
GTGACGGAAT CTCAACTCAC AAATATGGAT GTACTTACCC TGCGCCGCAT TCCAGCTATC
GAATATATCA ATGTCAATGT TGACAAAGAC GCAGAAATGA ATCTCGGGGG CGAGAGTACC
CATGTATGGA TAACAGGCGT GGATCCAGCT GTCTGGTCTA AAATCTCAAA TAAAGATGTA
GAGAAGGGCC GAATGTTGGA AACTGGAGAT CGGAATGTTG TGGTTCTTTC AAATGAGCTC
GCAAAGAATA CTTTCACGAG GGAGATCAGG CTTAACGAGA TAATTCTATT GAATGGCAAG
TCATACAGGG TAATTGGAAT TCTGGCAACG GGTAGTGGAC TTCTTGGAGG TCTTTCAGGA
CTTTTCGGTA GCAGTATCTA TATGCCTTAC CAGGATACAT ATTCCATTCC CAGTAATACG
GATCTTTCTG AGACAGAAAC GGATGATTAC AGTGCAGATG TCTACAGCAC AATAGAGGTC
AAACTCAAGA AAGATGCAGA TTATGAAGCA GCCATTGAAG AGATCGAGCG CAAAATGAGG
CTATCGAGAA GAGTTACTGA AGATACCCAG GACTTCTATG TGAATTCTCA AAAAGAAGTA
ATTGAGAGTA CCAGAACGAT GATTAACGGT CTTACTGCCT TCTTGGCGTT TATTGCAGGT
ATTTCTCTCC TTGTAGGTTC GACAGGAATC GCGAATACAA TGTTTACGTC TGTCCTTGAG
AAGACTAAGG AGATCGGAAT CATGAAAGCC ATAGGAGCAA AAAACCAGGA TATAATGCTG
ATCTTTCTTT GCAATTCCGC AATGATCAGC CTTGTAGGAG GGATCATAGG TATTCTCATT
GGCACAGTTG CAGTGCAGGC AGTTCTTTTC TTCATCTCTT TAAAAATGAA TGCTCCCTTC
GAATTTGCTC TCAGCTTTAA AGCTACCTTT ATTTCGACCT TAGTTTCCAT AGTTGTGGGT
CTGATTGCAG GTCTCGTGCC TGCAAAGAAC GCCTCGGAAC TGAAACCTGT AGATGCACTG
AGGTATGAAT AA
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| Protein sequence | MKPGKILKIA FSMVKANKLR SWLTIIGIII GIASVMAIVT TGEYFEKEVT ETLEGFGGDI
ITIVASTPFQ VTDEEFVVAS SEDTDGSSDV SGDNFETNTE TEENEEETQD STSNSLEFEQ
VTESQLTNMD VLTLRRIPAI EYINVNVDKD AEMNLGGEST HVWITGVDPA VWSKISNKDV
EKGRMLETGD RNVVVLSNEL AKNTFTREIR LNEIILLNGK SYRVIGILAT GSGLLGGLSG
LFGSSIYMPY QDTYSIPSNT DLSETETDDY SADVYSTIEV KLKKDADYEA AIEEIERKMR
LSRRVTEDTQ DFYVNSQKEV IESTRTMING LTAFLAFIAG ISLLVGSTGI ANTMFTSVLE
KTKEIGIMKA IGAKNQDIML IFLCNSAMIS LVGGIIGILI GTVAVQAVLF FISLKMNAPF
EFALSFKATF ISTLVSIVVG LIAGLVPAKN ASELKPVDAL RYE
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