Gene Mbar_A3261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3261 
Symbol 
ID3627812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4186504 
End bp4187151 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content51% 
IMG OID637702097 
Producthypothetical protein 
Protein accessionYP_306722 
Protein GI73670707 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1387] Histidinol phosphatase and related hydrolases of the PHP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.260936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.321934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATAGATC TTCACACTCA CACAATTTTC AGTGATGGGG AACTGATCCC CAGCGAACTT 
GTCCGGCGGG CGGTTATTCA TGGCTATAAG GCTATTGCAC TTACCGACCA TGCCGATTAC
ACCAATCTCG AACAGCTTAT CGAAGCGGGA CAGAAAGCAA AATACCTTGA AAATGAATGG
GACATCCGCG TTCTATCTGG GGTTGAACTA ACACATGTGC CACCAAGGAA GATTGCCCCT
CTTGCAAAGA AAGCAAAAGA GCTGGGTGCA GAAATTGTGG TCGTGCATGG AGAGACCACC
TCCGAGCCAG TCGCCCCCGG AACAAACGCA GCATCTGTTG CATGTGATTA TGTGGACATC
CTGGCCCACC CGGGCCTGAT CTCCGCGGAA GATGTCGAGA AGGCTAAAGA GAACAATGTC
TGCCTCGAAA TTACAGCCAG GAACGGACAC AACCGGACAA ATGGCCATGT TGCCAGGCTT
GCCCTTGAGA TCGGCGCGAC GCTTCTGGTA AATACTGACA CACATGCCCC TGAAGACCTT
ATCACCGATG AAACGGCCCT GAAAATCGCG AGGGGGGCAG GGCTTACCGA GGCAAGGGCG
AGAGAAACAT TAAAAGCGTC AGCGAGAAAA ATAGCAGAGA CTGTTTAA
 
Protein sequence
MIDLHTHTIF SDGELIPSEL VRRAVIHGYK AIALTDHADY TNLEQLIEAG QKAKYLENEW 
DIRVLSGVEL THVPPRKIAP LAKKAKELGA EIVVVHGETT SEPVAPGTNA ASVACDYVDI
LAHPGLISAE DVEKAKENNV CLEITARNGH NRTNGHVARL ALEIGATLLV NTDTHAPEDL
ITDETALKIA RGAGLTEARA RETLKASARK IAETV