| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3259 |
|---|
| Symbol | |
|---|
| ID | 3627810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 4183969 |
|---|
| End bp | 4184715 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637702095 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_306720 |
|---|
| Protein GI | 73670705 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.454805 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATAATA GAGAAGGAAT TCAGGGTCAT ATTTTATCCT TTATAGACTT TTCAAAAGCC
AGTACATTTT TGGATATTGG TTGTGGTAAA GGTAATGATC TAATAGAAAT TAGTAATAGG
ACCTGCAAAG AAGCTAAATT GTATGGTGTC GATGTTAAGG CTAACCTGAT AGAGTTTGCA
AAAATGCAGA CTGAAGGGGA TTGTCGGTTT ACATTTAATG TTTATGATGT AGAAGATGGT
CTCAAATTCG AAGACGAGTC AATAGATGTT ATCATCAGTT GTAATGTATT AGAATGCATC
AAAAATAAAA GTAAATTACT ACACGAAATT CATAGAGTGC TGAAGCCCGA TGGAAAAATT
ATTATGGCGC ATTTTGATTG GGATACACAA ATTTTCAATG CTTTTGATAA AAACCTTTAT
AGAAAGCTTA TCCATACATA TAGCGATTGG CAGCAGCCCT GGATGAATGA TTGTGATGCC
TGGATGGGAC GAAGAATTTC AGGTGTATTT AACGAGACAG GCTTATTTAG TGGAAATATA
TTTACTTATG TGGTGACTGA ATCCGAGTAT AAAGAAGGAT TCAGGGGTTA TTCATTGATA
AATGAGGAAT TTAAAGCACT TGTTGAAAAA GGAATAATCA AAAATACTGA GTTTGAATTA
TTTAAGGATC AAATAATTCA ACTAGAAAAG ACAGGACATT ATTTTTACAG TGTAAATTTG
TATACATATG TAGGTCAGAA GAAATAA
|
|---|
| Protein sequence | MYNREGIQGH ILSFIDFSKA STFLDIGCGK GNDLIEISNR TCKEAKLYGV DVKANLIEFA
KMQTEGDCRF TFNVYDVEDG LKFEDESIDV IISCNVLECI KNKSKLLHEI HRVLKPDGKI
IMAHFDWDTQ IFNAFDKNLY RKLIHTYSDW QQPWMNDCDA WMGRRISGVF NETGLFSGNI
FTYVVTESEY KEGFRGYSLI NEEFKALVEK GIIKNTEFEL FKDQIIQLEK TGHYFYSVNL
YTYVGQKK
|
|---|
| |