Gene Mbar_A3258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3258 
Symbol 
ID3627735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4182413 
End bp4183144 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content41% 
IMG OID637702094 
Producthypothetical protein 
Protein accessionYP_306719 
Protein GI73670704 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.213289 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.46952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAGA TGCTAACATT GAAAAATGAA AGAAAAGAAA GAAAAACGCG TTTATGTAAC 
TTTACCTCTG AGTCGGTGGA GCTTGGAATA CTTCTTGCAA TTGTAGGGGG ATTTCTGGAC
GCTTATACAT TCGTTGGAAG AGGCGGAGTT TTCGCTAATG CCCAGACTGG AAACGTCGTG
CTTATGGGCA TAGAAGCTGC AGCAGGAGAC TGGAGACAGG CAGTGCTTCA TGCTGTACCT
ATTCTGGCAT TCATGGCTGG AGTAATAGTT GCTGAGATGA TTAAAAGTCC TTCAATGCGC
CTGCCTATAC CGGAATCTGA AAGGGCAGTT TTAATTCTTG AAACTGTAGT CCTTTTTATT
GTAGGCTTTA TACCTTACAC CAGTCCAGAT ATCATAGTGA CTGTTACAAT TTCATTTGTC
TCTTCGGTTC AGATATCTTC ATTTCGCAAA CTCGTTGGTT CTACGTATAG CACAACAATG
GTTACTGGAA ACTTACGTTC AGCTACACAG GAAGCTTATA TCGCTTTCAC AAAAAAAGAC
GATGAATCGG CTTGCAGAAC CGTTCGATAC ACTACAATTA ACCTTTCGTT TCTAGCAGGA
GCTATTTTAG GAGGGTTGCT TACATCATTT ATTGGGGTTA AAGCCGTGTG GATACCTGTT
ATCGTGCTAA TATGCTCTAT AATTTTGTTC AATAACGAGC GTAAGGATGA GGCCGTTGGT
ATTGAAATAT AA
 
Protein sequence
MIKMLTLKNE RKERKTRLCN FTSESVELGI LLAIVGGFLD AYTFVGRGGV FANAQTGNVV 
LMGIEAAAGD WRQAVLHAVP ILAFMAGVIV AEMIKSPSMR LPIPESERAV LILETVVLFI
VGFIPYTSPD IIVTVTISFV SSVQISSFRK LVGSTYSTTM VTGNLRSATQ EAYIAFTKKD
DESACRTVRY TTINLSFLAG AILGGLLTSF IGVKAVWIPV IVLICSIILF NNERKDEAVG
IEI