Gene Mbar_A3233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3233 
Symbol 
ID3627350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4150979 
End bp4151701 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content47% 
IMG OID637702070 
Producthypothetical protein 
Protein accessionYP_306695 
Protein GI73670680 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1491] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0492905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0819444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTAG ATAAGTCGCA ATCAGGTAGA CCGTACGCTG GCAGATCAGC TGCTGAAAAA 
CCTTCTTATG GCGGCAAGCG TCCGACAGGC AAACCGCAAT CCGAGAGACA ATCAGAAAGA
GCCCCGCGCT CATCCAGAAA GTCCCAGGAA AGCTCACAGG AAAGAGAGGA ATATACATGG
GTTCTGGACT ATCTCCCATA TGGGAAATCA GTTGACGGTG CCGCCGCATA TCAGAAAAAA
CCTCTTGTTC AGGCTGTGGG AGATAAAAAA TTTACTCTTA TGGAGCTTGT TCCCAAAAAT
GGTGTGATTC CTCAGATCCA GTCCAGAGTT TATATCGGAT CTGGAAACAG AGATGAAATC
GACCACGTAA AACAGAGAAT AGGCTACTCG GATCTTACGA CGGGGGCGAA TCTCGAATTG
CCTTTTATCC TTGAGGCTTG TGTGAGGTAT CAGGAAACGC GCTTTGTAAA GTTTTTCAAC
GAGGCCCATT CCATAACTAC CCGTCTGCAC ATGCTTGACC TCCTTCCCGG AATAGGCAAA
AAACTCATGT GGTCTATAAT TGATGAGCGC AAAAAAGGAG ACTTCAAGAG TTTTCAGGAT
ATCCGGGAAA GGATTCCAAG CCTGCATGAC CCGGCTAAAG TCCTTGCCCA CAGGATTGAA
GATGAACTCA AGGATGATTT CATCAAGTAC AGGCTGTTCA CAGCTCCACC GCGCCGACAG
TAA
 
Protein sequence
MRVDKSQSGR PYAGRSAAEK PSYGGKRPTG KPQSERQSER APRSSRKSQE SSQEREEYTW 
VLDYLPYGKS VDGAAAYQKK PLVQAVGDKK FTLMELVPKN GVIPQIQSRV YIGSGNRDEI
DHVKQRIGYS DLTTGANLEL PFILEACVRY QETRFVKFFN EAHSITTRLH MLDLLPGIGK
KLMWSIIDER KKGDFKSFQD IRERIPSLHD PAKVLAHRIE DELKDDFIKY RLFTAPPRRQ