Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3233 |
Symbol | |
ID | 3627350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 4150979 |
End bp | 4151701 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637702070 |
Product | hypothetical protein |
Protein accession | YP_306695 |
Protein GI | 73670680 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1491] Predicted RNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0492905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0819444 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGTAG ATAAGTCGCA ATCAGGTAGA CCGTACGCTG GCAGATCAGC TGCTGAAAAA CCTTCTTATG GCGGCAAGCG TCCGACAGGC AAACCGCAAT CCGAGAGACA ATCAGAAAGA GCCCCGCGCT CATCCAGAAA GTCCCAGGAA AGCTCACAGG AAAGAGAGGA ATATACATGG GTTCTGGACT ATCTCCCATA TGGGAAATCA GTTGACGGTG CCGCCGCATA TCAGAAAAAA CCTCTTGTTC AGGCTGTGGG AGATAAAAAA TTTACTCTTA TGGAGCTTGT TCCCAAAAAT GGTGTGATTC CTCAGATCCA GTCCAGAGTT TATATCGGAT CTGGAAACAG AGATGAAATC GACCACGTAA AACAGAGAAT AGGCTACTCG GATCTTACGA CGGGGGCGAA TCTCGAATTG CCTTTTATCC TTGAGGCTTG TGTGAGGTAT CAGGAAACGC GCTTTGTAAA GTTTTTCAAC GAGGCCCATT CCATAACTAC CCGTCTGCAC ATGCTTGACC TCCTTCCCGG AATAGGCAAA AAACTCATGT GGTCTATAAT TGATGAGCGC AAAAAAGGAG ACTTCAAGAG TTTTCAGGAT ATCCGGGAAA GGATTCCAAG CCTGCATGAC CCGGCTAAAG TCCTTGCCCA CAGGATTGAA GATGAACTCA AGGATGATTT CATCAAGTAC AGGCTGTTCA CAGCTCCACC GCGCCGACAG TAA
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Protein sequence | MRVDKSQSGR PYAGRSAAEK PSYGGKRPTG KPQSERQSER APRSSRKSQE SSQEREEYTW VLDYLPYGKS VDGAAAYQKK PLVQAVGDKK FTLMELVPKN GVIPQIQSRV YIGSGNRDEI DHVKQRIGYS DLTTGANLEL PFILEACVRY QETRFVKFFN EAHSITTRLH MLDLLPGIGK KLMWSIIDER KKGDFKSFQD IRERIPSLHD PAKVLAHRIE DELKDDFIKY RLFTAPPRRQ
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