Gene Mbar_A3225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3225 
Symbol 
ID3627342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4141536 
End bp4142192 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content46% 
IMG OID637702062 
Productcell surface lipoprotein 
Protein accessionYP_306687 
Protein GI73670672 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00779237 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0523754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAACAA AAAAAATAAT TTTACTCCTG ATAGCCCTGT CAGTAATAAT ATCAGGCTGC 
TTGAGCTCGG AAGAGGAGAA GAAGAATGGG GAAGAAGACC GGGAGGCAGG CGGCAGTTCA
GGAGGCTCGC AAAGACAAAG AGAAGTAAGA ACACCTGTAG GAATGCAGGA AGAAACGTGG
ACTCCAGAAG AGACGGAAAC TGAAGGGGAA ACGTGGACAA CGGAAAAAAC GGAAACACAG
GAAGAGTTTG AAACACCGGC AGAAATGGGA ACACAGGTAG AATTGGACAC TCTAGAAAAA
GCAGAAATTT CTGGAATACC TAATAAGCCC GAGATGGAGC AAACAGAAGT CTGGAATGGG
AAAGGGGGGC AAAATGGAGC CATCCAGCCT GGCGGAACCG TACCGACGTC ACACCTTGTG
AGGCTTAAGA ATTATCTTAT GGTTCCTTCA AGCCTGAAAA TTAATATCGG AGATACGGTT
GTTTGGAGAA ATTACCAGGA GTCCAGTGTT CTTACCCTGA CCAGCCAGGA GCACCTTTTC
GAGGATAAAA GGCTCGCATA TGGAAATGCT CTGGAGTATA CGTTCAATGA GCCAGGAAGC
TACAATTTCA GTGCAAAAGG ATATCCGAAA ATGCAGACGA CCATCACTGT AAAATAA
 
Protein sequence
MATKKIILLL IALSVIISGC LSSEEEKKNG EEDREAGGSS GGSQRQREVR TPVGMQEETW 
TPEETETEGE TWTTEKTETQ EEFETPAEMG TQVELDTLEK AEISGIPNKP EMEQTEVWNG
KGGQNGAIQP GGTVPTSHLV RLKNYLMVPS SLKINIGDTV VWRNYQESSV LTLTSQEHLF
EDKRLAYGNA LEYTFNEPGS YNFSAKGYPK MQTTITVK