Gene Mbar_A3213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3213 
Symbol 
ID3627116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4130855 
End bp4131415 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content42% 
IMG OID637702050 
Producthypothetical protein 
Protein accessionYP_306675 
Protein GI73670660 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.760781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0305677 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTG TAAGATTCAT TGCAGGAATG CGTTTTTTCG TGTTGATCCC AGTGATAGGG 
TTGGCGATTG CTGCTTGCGT CTTATTTGTT AAAGGCGGCA TAGATATTAT TCACTTTATG
GAAGAACTCA TTGCCGGAAT GTCAAAAGAA GGTCCAGAAG GGAGTATCAT TGTTGAAATT
GTGGAGACTG TCCACCTCTT CTTAGTCGGT ACAGTGCTTT TCCTTACATC TTTTGGGCTA
TACCAGTTGT TTATCCAGCC GCTACCCTTA CCGGAATGGG TGAAAGTGAA CAATCTTGAA
GAGCTAGAAT TAAACCTCGT GGGGCTCACT GTTGTCGTAC TGGGGGTTAA TTTCTTGAGC
GTTATCTTTG AACCGCGAGA GATAGATTTA GCGGTATACG GAATAGGCTA TGCCTTGCCC
ATTGCAGCCC TGGCTTACTT CATGAAAGTA CGTTCACATA TTAGCAAAGG AAACAGCGAG
GGAGGACAAT TGAAAACTAT GGATGAAGTT ATCTCTGCAA ACAGCGAATC CAATTGGTTA
ACAAACAAAA AGAAAGAATA A
 
Protein sequence
MKVVRFIAGM RFFVLIPVIG LAIAACVLFV KGGIDIIHFM EELIAGMSKE GPEGSIIVEI 
VETVHLFLVG TVLFLTSFGL YQLFIQPLPL PEWVKVNNLE ELELNLVGLT VVVLGVNFLS
VIFEPREIDL AVYGIGYALP IAALAYFMKV RSHISKGNSE GGQLKTMDEV ISANSESNWL
TNKKKE