Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3213 |
Symbol | |
ID | 3627116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 4130855 |
End bp | 4131415 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637702050 |
Product | hypothetical protein |
Protein accession | YP_306675 |
Protein GI | 73670660 |
COG category | [S] Function unknown |
COG ID | [COG2862] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.760781 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0305677 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTTG TAAGATTCAT TGCAGGAATG CGTTTTTTCG TGTTGATCCC AGTGATAGGG TTGGCGATTG CTGCTTGCGT CTTATTTGTT AAAGGCGGCA TAGATATTAT TCACTTTATG GAAGAACTCA TTGCCGGAAT GTCAAAAGAA GGTCCAGAAG GGAGTATCAT TGTTGAAATT GTGGAGACTG TCCACCTCTT CTTAGTCGGT ACAGTGCTTT TCCTTACATC TTTTGGGCTA TACCAGTTGT TTATCCAGCC GCTACCCTTA CCGGAATGGG TGAAAGTGAA CAATCTTGAA GAGCTAGAAT TAAACCTCGT GGGGCTCACT GTTGTCGTAC TGGGGGTTAA TTTCTTGAGC GTTATCTTTG AACCGCGAGA GATAGATTTA GCGGTATACG GAATAGGCTA TGCCTTGCCC ATTGCAGCCC TGGCTTACTT CATGAAAGTA CGTTCACATA TTAGCAAAGG AAACAGCGAG GGAGGACAAT TGAAAACTAT GGATGAAGTT ATCTCTGCAA ACAGCGAATC CAATTGGTTA ACAAACAAAA AGAAAGAATA A
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Protein sequence | MKVVRFIAGM RFFVLIPVIG LAIAACVLFV KGGIDIIHFM EELIAGMSKE GPEGSIIVEI VETVHLFLVG TVLFLTSFGL YQLFIQPLPL PEWVKVNNLE ELELNLVGLT VVVLGVNFLS VIFEPREIDL AVYGIGYALP IAALAYFMKV RSHISKGNSE GGQLKTMDEV ISANSESNWL TNKKKE
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