Gene Mbar_A3210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3210 
Symbol 
ID3627113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4125924 
End bp4128200 
Gene Length2277 bp 
Protein Length758 aa 
Translation table11 
GC content43% 
IMG OID637702048 
Producthypothetical protein 
Protein accessionYP_306673 
Protein GI73670658 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0308] Aminopeptidase N 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.336034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00714683 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAATC GAATTCCTTT TTTGTCAGGC TTCTCCTTTC TTTTCAATGA AATCAGGCTA 
ATTTCCAGAT CAAAGCTGGC ACTGATGTCC ATATTCCTGG CTGTCCTGGC TACAGTACTG
GGGCTGAAAG CTATCGATTA TACTAATGAG CGTAGCCTGG TGGGGCTCGC AAAAACCTCT
TTTACCGTAG CTCTTGGACC TGCACAATAC GCAGCAATAG CCGGTTCCTT GCTCTTTGCA
GTTCTGACGC TTATGCTGTT GAGCAAGGAC CACAGGAATA ACAGCACGAG CCTTTTGAAT
ACATCCTGTA ATTATTCTCA GCTGCTGGTA TTCCGTACGG CAGCAATCCT CTCCATCGGG
ATTTTTACAG TAGTGCTGGG GGGAATTGCC TTATATGCAG TCCAGGTATT TGTCCTGGAA
ATTACCTTTG ATCCTGTAGT TTCTCTGTCC AGTCTGCTAG TAATTACGCT TGCAGGAATC
TTTTTTACAG TCCTGATCTG CAGTGGACTT TACCTGATTA CGGAAAACCT GGATATCTCT
TTTCTTGCAT ACTCTATTCT TTTTTTCATG AGTATAGGTA GCTCAAATTA CCTGTTAAAA
TGGGTTCAGA CTTCGGCGGT GATGTATTCT GACTTCGGAG GAATCCTTCC GGTTTTTAAG
TTTGTTCTCT ACAACCGTCT TCTCTGGACT TTTGTTTCCA CCGGGATTTT TGCCGTCGGG
CTGCTGTGCA GAAGACGATA TGAATCAAAT TTGAGCTTGT CTTTGAAGCT CAATGCAAAG
CAGCTCTGGA TTCCTGTTCT GGTTCTGCTG CTTCTGGGCG CTTCTCTTTT CGTCTATATC
AACGAACCCT ACATTAACCG AAATGACAGT GTATTCAAAA CCGAACTTAA GGCAAATGAA
AATGTAAAAC TAACTCATGT TTCCTCGAAT GTTCAGTTAT TTCCTGTAAA CCAGAACCTT
TCGGCCAGGG TACTCTATGA ATTTGAAAAA GAATCGGGCA TTGAATACAT TGATTTTATC
ACAAATTCAG GGCTTCATAT AAAAAAATTT ACTGTGAATG GAGTTGAGGC TCCCAATTCC
TTAAAGAGGA TAAAAGGAAC GGACAGGGTA CGTTTGGAAG TCCCTGCCGA ATCAAGGAAC
GTTACCATAG ATATTAGCTA CGCAGGCAGG CTCAAATATC CTTCTTCAAT CGGCTTTCCC
GGTTATATCT CAAAGGAGAG CATATACCTG CTGGAAAACT CACACTGGAT TTTCGAGCCC
CTGACCGGTT CACAAGATAT GATAGAGATA AAGGGTTCTG TCACAGCTCC GAAGAACCTG
GTAATGGTCG TTCCAGGGGA ATTAACAGGA GTTCTGGAAG AACACGGCCG AAAAACCTGG
GAATACAGTG CCCTTTCCAA TGATTTTTCA CCCGGAGTCT TTGCAGGGAA CTACGAAGTA
AAAAAGATGC TGGCTGGCAG TACTGAGATC GAGTTCTATT ACAGTCCAAA ACACAGGGCG
TATATAGAAG CCCTTGGGAT TGAAAACTAT TTAATAAATA TTGTTTCCTA TTATGAAAAA
AACATAGGTG TCTATCCATA TCAGGAATAC CCTCTAAAAA TAGTAGAAAG TTCTATCTAT
AAGACCGGCG GGCATTCCAC CCTGAATATC GTAACGGTTT CAGAATATGT GTTTAACAGG
GAATTGGGCA GGGAAATTGG AGGAGATTCA GATAGCTTTT CCCCTGATCT TACCTCTCTT
AAAGACATCA CCTTTGTTGG GGATATGGAC CTGTTAGCCC ATGAAATCGC TCATCAGTGG
TGGGGAACAG GAGTTTTCGT GGAGGAAAAT CCCCCCTGGT CTTCGGAAGG GCTTGCAGAT
TACCTGGCCT ACAAATACAT AACAGAAGAG TTTGGTTCCT ATGCATCGGC ATATATCCCT
GCAATGTGGA AAGGCAGGGT AGATTCCATG GAAAACAGTT ATTACTATGC GAATCCGAAA
ATGCTGGAAA ACCTGCCTGA GAAACAGAGA CAAAAGTATG AAATGGAGAC TCGAAAAATA
GAACTTTATT CCCAGATGCC TATGCTCTTG CTGAGAGCCG AAGAGCTGCT TGGAGAAGAT
TCATTTTTTA TAAAGTTATC GGATATTTAT ATGGATTACA GGTTTAAATC CCTTTCTTAT
GAGGAATTCC TGTCTTCAAT AGGTCTGAGT GAAGCCGATC TTGATGAAAA CCCGGTAAAG
GGTAAAGAAA CAGGGACAGA AGAAACAGCA GAGAGGGAGG CGGTTTTCGA TGAATAA
 
Protein sequence
MANRIPFLSG FSFLFNEIRL ISRSKLALMS IFLAVLATVL GLKAIDYTNE RSLVGLAKTS 
FTVALGPAQY AAIAGSLLFA VLTLMLLSKD HRNNSTSLLN TSCNYSQLLV FRTAAILSIG
IFTVVLGGIA LYAVQVFVLE ITFDPVVSLS SLLVITLAGI FFTVLICSGL YLITENLDIS
FLAYSILFFM SIGSSNYLLK WVQTSAVMYS DFGGILPVFK FVLYNRLLWT FVSTGIFAVG
LLCRRRYESN LSLSLKLNAK QLWIPVLVLL LLGASLFVYI NEPYINRNDS VFKTELKANE
NVKLTHVSSN VQLFPVNQNL SARVLYEFEK ESGIEYIDFI TNSGLHIKKF TVNGVEAPNS
LKRIKGTDRV RLEVPAESRN VTIDISYAGR LKYPSSIGFP GYISKESIYL LENSHWIFEP
LTGSQDMIEI KGSVTAPKNL VMVVPGELTG VLEEHGRKTW EYSALSNDFS PGVFAGNYEV
KKMLAGSTEI EFYYSPKHRA YIEALGIENY LINIVSYYEK NIGVYPYQEY PLKIVESSIY
KTGGHSTLNI VTVSEYVFNR ELGREIGGDS DSFSPDLTSL KDITFVGDMD LLAHEIAHQW
WGTGVFVEEN PPWSSEGLAD YLAYKYITEE FGSYASAYIP AMWKGRVDSM ENSYYYANPK
MLENLPEKQR QKYEMETRKI ELYSQMPMLL LRAEELLGED SFFIKLSDIY MDYRFKSLSY
EEFLSSIGLS EADLDENPVK GKETGTEETA EREAVFDE