Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3210 |
Symbol | |
ID | 3627113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4125924 |
End bp | 4128200 |
Gene Length | 2277 bp |
Protein Length | 758 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637702048 |
Product | hypothetical protein |
Protein accession | YP_306673 |
Protein GI | 73670658 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0308] Aminopeptidase N |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.336034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00714683 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCAAATC GAATTCCTTT TTTGTCAGGC TTCTCCTTTC TTTTCAATGA AATCAGGCTA ATTTCCAGAT CAAAGCTGGC ACTGATGTCC ATATTCCTGG CTGTCCTGGC TACAGTACTG GGGCTGAAAG CTATCGATTA TACTAATGAG CGTAGCCTGG TGGGGCTCGC AAAAACCTCT TTTACCGTAG CTCTTGGACC TGCACAATAC GCAGCAATAG CCGGTTCCTT GCTCTTTGCA GTTCTGACGC TTATGCTGTT GAGCAAGGAC CACAGGAATA ACAGCACGAG CCTTTTGAAT ACATCCTGTA ATTATTCTCA GCTGCTGGTA TTCCGTACGG CAGCAATCCT CTCCATCGGG ATTTTTACAG TAGTGCTGGG GGGAATTGCC TTATATGCAG TCCAGGTATT TGTCCTGGAA ATTACCTTTG ATCCTGTAGT TTCTCTGTCC AGTCTGCTAG TAATTACGCT TGCAGGAATC TTTTTTACAG TCCTGATCTG CAGTGGACTT TACCTGATTA CGGAAAACCT GGATATCTCT TTTCTTGCAT ACTCTATTCT TTTTTTCATG AGTATAGGTA GCTCAAATTA CCTGTTAAAA TGGGTTCAGA CTTCGGCGGT GATGTATTCT GACTTCGGAG GAATCCTTCC GGTTTTTAAG TTTGTTCTCT ACAACCGTCT TCTCTGGACT TTTGTTTCCA CCGGGATTTT TGCCGTCGGG CTGCTGTGCA GAAGACGATA TGAATCAAAT TTGAGCTTGT CTTTGAAGCT CAATGCAAAG CAGCTCTGGA TTCCTGTTCT GGTTCTGCTG CTTCTGGGCG CTTCTCTTTT CGTCTATATC AACGAACCCT ACATTAACCG AAATGACAGT GTATTCAAAA CCGAACTTAA GGCAAATGAA AATGTAAAAC TAACTCATGT TTCCTCGAAT GTTCAGTTAT TTCCTGTAAA CCAGAACCTT TCGGCCAGGG TACTCTATGA ATTTGAAAAA GAATCGGGCA TTGAATACAT TGATTTTATC ACAAATTCAG GGCTTCATAT AAAAAAATTT ACTGTGAATG GAGTTGAGGC TCCCAATTCC TTAAAGAGGA TAAAAGGAAC GGACAGGGTA CGTTTGGAAG TCCCTGCCGA ATCAAGGAAC GTTACCATAG ATATTAGCTA CGCAGGCAGG CTCAAATATC CTTCTTCAAT CGGCTTTCCC GGTTATATCT CAAAGGAGAG CATATACCTG CTGGAAAACT CACACTGGAT TTTCGAGCCC CTGACCGGTT CACAAGATAT GATAGAGATA AAGGGTTCTG TCACAGCTCC GAAGAACCTG GTAATGGTCG TTCCAGGGGA ATTAACAGGA GTTCTGGAAG AACACGGCCG AAAAACCTGG GAATACAGTG CCCTTTCCAA TGATTTTTCA CCCGGAGTCT TTGCAGGGAA CTACGAAGTA AAAAAGATGC TGGCTGGCAG TACTGAGATC GAGTTCTATT ACAGTCCAAA ACACAGGGCG TATATAGAAG CCCTTGGGAT TGAAAACTAT TTAATAAATA TTGTTTCCTA TTATGAAAAA AACATAGGTG TCTATCCATA TCAGGAATAC CCTCTAAAAA TAGTAGAAAG TTCTATCTAT AAGACCGGCG GGCATTCCAC CCTGAATATC GTAACGGTTT CAGAATATGT GTTTAACAGG GAATTGGGCA GGGAAATTGG AGGAGATTCA GATAGCTTTT CCCCTGATCT TACCTCTCTT AAAGACATCA CCTTTGTTGG GGATATGGAC CTGTTAGCCC ATGAAATCGC TCATCAGTGG TGGGGAACAG GAGTTTTCGT GGAGGAAAAT CCCCCCTGGT CTTCGGAAGG GCTTGCAGAT TACCTGGCCT ACAAATACAT AACAGAAGAG TTTGGTTCCT ATGCATCGGC ATATATCCCT GCAATGTGGA AAGGCAGGGT AGATTCCATG GAAAACAGTT ATTACTATGC GAATCCGAAA ATGCTGGAAA ACCTGCCTGA GAAACAGAGA CAAAAGTATG AAATGGAGAC TCGAAAAATA GAACTTTATT CCCAGATGCC TATGCTCTTG CTGAGAGCCG AAGAGCTGCT TGGAGAAGAT TCATTTTTTA TAAAGTTATC GGATATTTAT ATGGATTACA GGTTTAAATC CCTTTCTTAT GAGGAATTCC TGTCTTCAAT AGGTCTGAGT GAAGCCGATC TTGATGAAAA CCCGGTAAAG GGTAAAGAAA CAGGGACAGA AGAAACAGCA GAGAGGGAGG CGGTTTTCGA TGAATAA
|
Protein sequence | MANRIPFLSG FSFLFNEIRL ISRSKLALMS IFLAVLATVL GLKAIDYTNE RSLVGLAKTS FTVALGPAQY AAIAGSLLFA VLTLMLLSKD HRNNSTSLLN TSCNYSQLLV FRTAAILSIG IFTVVLGGIA LYAVQVFVLE ITFDPVVSLS SLLVITLAGI FFTVLICSGL YLITENLDIS FLAYSILFFM SIGSSNYLLK WVQTSAVMYS DFGGILPVFK FVLYNRLLWT FVSTGIFAVG LLCRRRYESN LSLSLKLNAK QLWIPVLVLL LLGASLFVYI NEPYINRNDS VFKTELKANE NVKLTHVSSN VQLFPVNQNL SARVLYEFEK ESGIEYIDFI TNSGLHIKKF TVNGVEAPNS LKRIKGTDRV RLEVPAESRN VTIDISYAGR LKYPSSIGFP GYISKESIYL LENSHWIFEP LTGSQDMIEI KGSVTAPKNL VMVVPGELTG VLEEHGRKTW EYSALSNDFS PGVFAGNYEV KKMLAGSTEI EFYYSPKHRA YIEALGIENY LINIVSYYEK NIGVYPYQEY PLKIVESSIY KTGGHSTLNI VTVSEYVFNR ELGREIGGDS DSFSPDLTSL KDITFVGDMD LLAHEIAHQW WGTGVFVEEN PPWSSEGLAD YLAYKYITEE FGSYASAYIP AMWKGRVDSM ENSYYYANPK MLENLPEKQR QKYEMETRKI ELYSQMPMLL LRAEELLGED SFFIKLSDIY MDYRFKSLSY EEFLSSIGLS EADLDENPVK GKETGTEETA EREAVFDE
|
| |