| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3197 |
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| Symbol | |
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| ID | 3627139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4111550 |
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| End bp | 4112737 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637702036 |
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| Product | O-GlcNAc transferase, p110 subunit |
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| Protein accession | YP_306661 |
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| Protein GI | 73670646 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02996] repeat-companion domain TIGR02996 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.187148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.017581 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTTG ATGCAGTTGG TGACTTCGTA TATAAAGTTA TTGGGACTAT AGGATCCGAT
AAGAAGAATC TGCGTTCTTC GATTGATTTT GCCCTGGATC TTGCGGAAGA AAAATCGTTA
TCCCCCAATG ATTTACTTGA CCTTTCGAAT GCCTGTAAGC AGCAGAAAAT GGTTATGGAA
GAATATGTTT TCGCAAAAGC CTGTTTCATA AGAGCTTCGG GAAAGCTCCG TGAAGAAGCC
TGTTTTTCGC TGGGCACTGC CGCGCATATT TTGGGCTTTT CTCTTGAAGC TGAGGCAAGT
TATCTGGAGG CCCTAAAAGA AAATCCAGAA AATGGAGATG TAAGGTGTGC CTATGCCGAA
CTTCTTTTAG ACCTTGGAAG GACAGAGGCT GCTGATAAGG AATATAAAAA GGTACTTGAA
GCTTCTCCAG AACATGTAAA AGCGAATACA GGATATGCTT ATCTCCTGAC CGAGTACGGG
TACGTAAGAG AAGCCGAAGA GTGCTACTCA AGGGCACTTA CGGCAGATCC TGACTATGTC
CCTGCCAGAG GCGGGTACGC AAACCTGCTC TTTGATCTGG GGAGACTCAG GGACGCGGAA
AAGGAATACA AGCTTGCAAT AATACTAGAT CCTGAAGACC CAAGCCTCCA TCACAACTGT
GGAGTTTTAC TTTCTTTCCT GGGGCGCTCT TCAGAAGCCG AAGGTGAGTA CAGAAAAGCT
CTTTCTCTTA ACCCGAGACA CAGGCGGACT CTTTTTAACT ACGGAAATCT CCTTGCAAGA
GAAGGCAGAG CTTCAGAAGC CGAAGAGCAA TACACGGAAG CCCTTGCCCT TGATCAGAAT
GATGCAAAAG TTCATTCCAA TTATGCAAAT CTTCTGGCCC GCTTTGGAAG GAGATATGAA
GCTGAAATGG AATACAAGAA AGCGCTCAGT CTGGACCCCG AGAGTGCTGA AGGACATTAC
AGTTACGGCA ACCTTCTTTC GGAGATCGGG CGCCTTGGTG AAGCCCAGGA CCAGTATGAG
AAGGCTCTTG TCTTGAATCC CTATTACCCA CCTATTCACT ACAGTTACGG CCTTCTTATG
AGAAAGATGG GGCACTTTGA CGAAGCCAAA AAGGAATATA CGAAGGCCAT GCAGCTCGAT
CCGGATATCG GAAGCAAAAT GACCGAAACC TGGATTATTC TGGACTAA
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| Protein sequence | MDFDAVGDFV YKVIGTIGSD KKNLRSSIDF ALDLAEEKSL SPNDLLDLSN ACKQQKMVME
EYVFAKACFI RASGKLREEA CFSLGTAAHI LGFSLEAEAS YLEALKENPE NGDVRCAYAE
LLLDLGRTEA ADKEYKKVLE ASPEHVKANT GYAYLLTEYG YVREAEECYS RALTADPDYV
PARGGYANLL FDLGRLRDAE KEYKLAIILD PEDPSLHHNC GVLLSFLGRS SEAEGEYRKA
LSLNPRHRRT LFNYGNLLAR EGRASEAEEQ YTEALALDQN DAKVHSNYAN LLARFGRRYE
AEMEYKKALS LDPESAEGHY SYGNLLSEIG RLGEAQDQYE KALVLNPYYP PIHYSYGLLM
RKMGHFDEAK KEYTKAMQLD PDIGSKMTET WIILD
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