Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3176 |
Symbol | |
ID | 3626865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 4088453 |
End bp | 4088800 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637702015 |
Product | nitrogen regulatory protein P-II |
Protein accession | YP_306640 |
Protein GI | 73670625 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0347] Nitrogen regulatory protein PII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00223348 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTAAAA TGTGCAAAAT CGAAGCAATA ATAAAGCCCA TGAAGCTGCA TGAGGTAAAA GATGCCCTTG AAGAAGCCGG GTATCCTAGC CTGACAGTAA CTGATGTCAA AGGACGTGGA CAGCAGAAAG GAATCGTACA GCAGTGGAGA GGTAAAAAAT ATTGTGTGGA TCTTCTTCCC AAAACCAAAA TAGAGATCGC AGCCCCTGAA GACAAAATTG AAGAGATTAT TAAAATTATT CAGAGTTCAG CGTATACTGG AGAAATTGGA GACGGAAAGA TCTTTGTTAC CCCCATTGAA ACTGTAGTTA GAATAAGAAC TGGAGAAAGA AATGGAGATG CTCTCTAA
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Protein sequence | MTKMCKIEAI IKPMKLHEVK DALEEAGYPS LTVTDVKGRG QQKGIVQQWR GKKYCVDLLP KTKIEIAAPE DKIEEIIKII QSSAYTGEIG DGKIFVTPIE TVVRIRTGER NGDAL
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