| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3127 |
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| Symbol | |
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| ID | 3626578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4021507 |
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| End bp | 4022373 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637701965 |
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| Product | shikimate kinase |
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| Protein accession | YP_306593 |
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| Protein GI | 73670578 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1685] Archaeal shikimate kinase |
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| TIGRFAM ID | [TIGR01920] shikimate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATAC TTGAAGGGCA CGCCTGCGCG TCGGGAGCAG GAACCATTAT CGCAGCATTT
GCAACCTGGA AGGGTGCTGC ATTTGGAACT GGCTTAAAAA CATATTCAGA GGTAGAACTC
TCTGATCGTG AGAGAAAAGT CCGCGGGTCG ATTGAGGGAA TGCCTGAAGC AGATACTTTT
CTTATTGAAA GGTGTGTTGA ACTTGTGCTT GAACACTTCG AGATTAAACT TGGAGGCAAG
GTAAAAACAA GCAGCAATAT TCCTCTTGCA GGTGGACTTA AGAGCAGCAG TGCAGCTGCC
AATGCAACTG TACTGGCAAC TTTAAATGCT ATTGGAGAAT CAATGCCTCC TCTTGATGCT
GTAAAACTTG GGGTAAAAGC TGCAAGAGAA GCAAAAGTAA CCATAACAGG GTCTTTTGAT
GACGCTTGTG CTTCTTTTTT TGGCGGAGTT GTGATCACTG ATAACCGGGA ATTGAAACTG
ATTAAAAGAG AAGAATACAA TTCAAAAGTC CTTATTTTTG CGCCGAACAG AAAAGTGTTC
AGTTCACAAA CAAATGTTAA ACGTTCAGAA CTCATTGCTC CGTATATAGA TATGGCATAT
GAACTTGCAC TCGCAGGAGA GTATGAAAAA GCAATGACTT TAAACGGTTT CCTCTACTGC
AGCGCTCTTG GCTTTGATAC TGAGTGCATT CTTCGAGCCC TGGAATGTGG CGTAAAAGGG
GTAAGTCTAT CCGGGTCGGG CCCGGCGTAT GTTGCGCTTG TCAAAGAAAA CCAGATCGAA
GAGCTCAGGT CGACCTGGGA AAGCTGTGGG ATCGAAGGCA GGGTTATAGA AACCTCTATA
AATAACAGAG ACGCAATGTC TTTGTGA
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| Protein sequence | MMILEGHACA SGAGTIIAAF ATWKGAAFGT GLKTYSEVEL SDRERKVRGS IEGMPEADTF
LIERCVELVL EHFEIKLGGK VKTSSNIPLA GGLKSSSAAA NATVLATLNA IGESMPPLDA
VKLGVKAARE AKVTITGSFD DACASFFGGV VITDNRELKL IKREEYNSKV LIFAPNRKVF
SSQTNVKRSE LIAPYIDMAY ELALAGEYEK AMTLNGFLYC SALGFDTECI LRALECGVKG
VSLSGSGPAY VALVKENQIE ELRSTWESCG IEGRVIETSI NNRDAMSL
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