| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3123 |
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| Symbol | |
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| ID | 3626574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4016248 |
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| End bp | 4018779 |
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| Gene Length | 2532 bp |
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| Protein Length | 843 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637701962 |
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| Product | hypothetical protein |
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| Protein accession | YP_306590 |
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| Protein GI | 73670575 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3
[TIGR01596] CRISPR-associated endonuclease Cas3-HD
[TIGR02621] CRISPR-associated helicase Cas3, Anaes-subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.44073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATCTCG AGTATAAACA GTTATTTCAA GAAGCTACTG GATTTGAGCC CTTTCCATAT
CAAGAGTTAC TAGCAACTAG AGAGAATCTA CCGGAACTCT TAAAGGTTCC GACTGGTGCT
GGCAAAACCT CTGGTGTGGT AATACCGTGG GTGTGGAGAA GGCGATTCGC AGAAGAAAGC
ATTCGTATCC GAACACCAAG AAGACTTATA TATTGCCTGC CAATGCGTGT TCTCGTAGAA
CAGACTTATG AGAATGTAAT CTCATGGCTG GATAGACTTG GGCTACTTGC TGGCAGTGCT
AGCTGGAAAA AACCAGAAGA AAAAACTGGG CTTATTGAAT ATTTACCCGA ACATAGACAA
CCTGATAATG AGAAGATTTC TGTACATCTA CTAATGGGCG GAGAAGACGC AGGCAAATGG
GCTGAATATC CTGAAAGAGA TGCAATACTG ATCGGGACTC AGGACATGTT GATTTCTCGG
GAATTGAACA GAGGATATGC GTCCAGCCGG TTTAGATGGC CTTTGGAGTT TGGACTATTA
AATAATGACT GTCTGTGGGT AATGGACGAA GTCCAGTTAA TGGGTGCTGG ACTTCCTACG
TCTGCTCAAA TGGAAGCTTT CAGACAAGGT TTCGGAACAT TTGGCAATTA TCATATTATC
TGGATGAGTG CAACTTGCGA AGAAGAATGG ATTAAAACAG TTGATTTCAA GAAACCTAAA
CTTGATCAAT TGAAGATAAG TCCTGAAGAC GCTAAAGTTG AGATGTTGCA CAAAAGACTA
ACAGCCTTTA AAAAGCTCGA AAAAGCTTCC ATAACTCTTA AAAACACGAA AAAAGAAGAT
TCCTCTAAGG AATATATAGA CAAACTCAGC AGACTAATTC AGACTCAGTA TCAACAAGCA
GAATCTGCTC CTTCTATAGT TGTCATAGTC AATACTGTGA ATCGTGCTCA GGATCTATAT
AAGAAATTAA TTAAGGAATA TCAAAGTAAA TCAGGCACAG ATACCTTAGA AATATTTTTG
CTTCATGGAA GATTTAGACC TCCTGAAAAA ACTGAAATTT TTAACAATTT CAAATCTGCT
ACCAATAAAA ATAAGGGAAA AATTCTGATC TCGACCCAGG TTATAGAAGC TGGAGTCGAT
ATCTCAGCTC ATATTCTGAT AACTGAACTT GCACCTTGGA GCAGCCTTGT CCAAAGATTT
GGTAGGCTTA ACAGGTACGG AGAGTATGAT GACTCTATAG TTCTTTGGAT TGACATAGAT
ACGAAAAAGG ACTCGCAAGT AGCTCTTCCA TACAGCGTTC AAGAGCTTAA CATTGCACGC
TCAAAACTAA AAGGACTCAA AGAAGTATCA CCACAGACAC TTGATGAAAT AACTCAACCT
CCAATGGATG CCCAGAGGCA TGTAATCAGG CGTAAAGATC TAGTTGATCT TTTTGATACT
ACACAGGATC TAACAGGAAA TGACATTGAT ATCTCTCGTT TCATAAGAGA TTCGGAAGAT
AGAGATGTTT TTGTCTATTG GAGAGAGTGG GAAGAAAATA AACCGCCAGA AGATTACAAA
GGACCGTTAA AAGAAGAGTT ATGTCAGGTT CCCATCGCCG ATTTTAGAAA CTTTTTGAAA
AACAAAAAGG AACAAATCTG GCTATGGGAT TATCTGGAAG GAAAATGGAT TAACCCAAAA
CCTAATAATA TCCATCCAGG CCAGACTTTT TTGATAAATT CACAAGCTGG AGGATATGAT
CTCAAAATTG GGTGGTCAAA GGATTGCAAA GATCGCGTAC CTCAGCGTTT TTCTGGATCA
GGTAACAATG ATTCAACCAG TAGCGATCCA GGAGTAAACT CCGGAAAATG GGAAACAATT
GCCAAACATG CAGACAATAC TTTAAAACAG ATGGAAAAAT TGCTTTCTGA TTTAGAGCCA
ATAGCCTGGG AACATGAAAA TACCTTGAAA AATGCAGCAT ACTATCACGA TATAGGAAAA
GCACATGAAG TTTTCCAGAA AGCTGTCCTG TCCGATATTG ATGAGGATAC AGATAATATG
AAGGAGAAAC TCTGGGCAAA ATCCGACCGG AATAGTGGAA TCAAATACGA AAGAAAACAT
TTCAGGCACG AATTAGCTTC TGCCCTTCTT TTGCTTCAAA ATGAAGACTT CATTGAAGAT
CTTGGGTCAA ATAATGTTAA TTTGATTGCA TATCTGGTGG CTGCACATCA CGGTAAAGTT
AGACTATCCA TACGATCTGT TCCTGGGGAA ACAGCTCCAG ACAACTTGGA GATAACTAGA
TTTGCAAGAG GTATATGGGA AGGGGATATA ATTCCTGAAA TTGATCTTGG AAACAATGTG
AAGATACCTT CAACGACTCT GGATCTCTCT CTGATGGAGA TTGGAATAGA CAAGTACGGA
AATCCATCCT GGCTTGAAAG AATGTGTGAA CTGCGTGATA ATCTAGGCCC CTTCAGATTA
GCATATCTTG AAGGTCTTGT GCGTATTGCC GATTGGAGAG CCAGTTCTCT TCAGGAGGGT
TCAGATGAGT AA
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| Protein sequence | MNLEYKQLFQ EATGFEPFPY QELLATRENL PELLKVPTGA GKTSGVVIPW VWRRRFAEES
IRIRTPRRLI YCLPMRVLVE QTYENVISWL DRLGLLAGSA SWKKPEEKTG LIEYLPEHRQ
PDNEKISVHL LMGGEDAGKW AEYPERDAIL IGTQDMLISR ELNRGYASSR FRWPLEFGLL
NNDCLWVMDE VQLMGAGLPT SAQMEAFRQG FGTFGNYHII WMSATCEEEW IKTVDFKKPK
LDQLKISPED AKVEMLHKRL TAFKKLEKAS ITLKNTKKED SSKEYIDKLS RLIQTQYQQA
ESAPSIVVIV NTVNRAQDLY KKLIKEYQSK SGTDTLEIFL LHGRFRPPEK TEIFNNFKSA
TNKNKGKILI STQVIEAGVD ISAHILITEL APWSSLVQRF GRLNRYGEYD DSIVLWIDID
TKKDSQVALP YSVQELNIAR SKLKGLKEVS PQTLDEITQP PMDAQRHVIR RKDLVDLFDT
TQDLTGNDID ISRFIRDSED RDVFVYWREW EENKPPEDYK GPLKEELCQV PIADFRNFLK
NKKEQIWLWD YLEGKWINPK PNNIHPGQTF LINSQAGGYD LKIGWSKDCK DRVPQRFSGS
GNNDSTSSDP GVNSGKWETI AKHADNTLKQ MEKLLSDLEP IAWEHENTLK NAAYYHDIGK
AHEVFQKAVL SDIDEDTDNM KEKLWAKSDR NSGIKYERKH FRHELASALL LLQNEDFIED
LGSNNVNLIA YLVAAHHGKV RLSIRSVPGE TAPDNLEITR FARGIWEGDI IPEIDLGNNV
KIPSTTLDLS LMEIGIDKYG NPSWLERMCE LRDNLGPFRL AYLEGLVRIA DWRASSLQEG
SDE
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