Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3118 |
Symbol | |
ID | 3626569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4009182 |
End bp | 4009529 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637701957 |
Product | hypothetical protein |
Protein accession | YP_306585 |
Protein GI | 73670570 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1343] Uncharacterized protein predicted to be involved in DNA repair |
TIGRFAM ID | [TIGR01573] CRISPR-associated endoribonuclease Cas2 |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00145067 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.997256 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTACAAGA TAAAAAGCAG AAAAATTTCA TATAAAACTA AAAGGGGAAA TATGTCAGGA TTAAACTGTT ACATCGTGAG TTATGACATC AAAGAGCCAA CTAGATTAAG ACAAGTGCAC AACACTGTTG AAGGATTTGG GTCTCCACTT CACTATTCAG TCTTTCGTTG TGACCTTTCA AAAAAAAGCA AAGTGGAACT CATTGCAGCG CTTACCGATA TAATAAATTC TGATGAAGAC AGTGTAATGA TAATAAATTT GGGCCCAGCG AACAAAAACC TTGATAAGAA GATAACTTTC ATAGGTCAGA AACCTGAAGT TGAAGAGGAA GATTTCATTA TTGTTTAA
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Protein sequence | MYKIKSRKIS YKTKRGNMSG LNCYIVSYDI KEPTRLRQVH NTVEGFGSPL HYSVFRCDLS KKSKVELIAA LTDIINSDED SVMIINLGPA NKNLDKKITF IGQKPEVEEE DFIIV
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