Gene Mbar_A3118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3118 
Symbol 
ID3626569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4009182 
End bp4009529 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content34% 
IMG OID637701957 
Producthypothetical protein 
Protein accessionYP_306585 
Protein GI73670570 
COG category[L] Replication, recombination and repair 
COG ID[COG1343] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00145067 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.997256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTACAAGA TAAAAAGCAG AAAAATTTCA TATAAAACTA AAAGGGGAAA TATGTCAGGA 
TTAAACTGTT ACATCGTGAG TTATGACATC AAAGAGCCAA CTAGATTAAG ACAAGTGCAC
AACACTGTTG AAGGATTTGG GTCTCCACTT CACTATTCAG TCTTTCGTTG TGACCTTTCA
AAAAAAAGCA AAGTGGAACT CATTGCAGCG CTTACCGATA TAATAAATTC TGATGAAGAC
AGTGTAATGA TAATAAATTT GGGCCCAGCG AACAAAAACC TTGATAAGAA GATAACTTTC
ATAGGTCAGA AACCTGAAGT TGAAGAGGAA GATTTCATTA TTGTTTAA
 
Protein sequence
MYKIKSRKIS YKTKRGNMSG LNCYIVSYDI KEPTRLRQVH NTVEGFGSPL HYSVFRCDLS 
KKSKVELIAA LTDIINSDED SVMIINLGPA NKNLDKKITF IGQKPEVEEE DFIIV