Gene Mbar_A3108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3108 
Symbol 
ID3625317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3996007 
End bp3996714 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content41% 
IMG OID637701946 
Producthypothetical protein 
Protein accessionYP_306575 
Protein GI73670560 
COG category[T] Signal transduction mechanisms 
COG ID[COG0467] RecA-superfamily ATPases implicated in signal transduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.10072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.443629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGGG TTTCAACAGG CATAGAGGAT CTGGACAGGA AGCTGAGTGG GGGTTATCCT 
GCAAATAAAG TAACCCTTAT AACCGGTATA GCAGGAAGCG GGAAAACAAT CTTCGGAATC
CATTTCGTAT ATAAAAACTG TCTTGAAGGC AGGAAATGTA TGATTATCGC AACTGAGGAA
AGTCCTGAAG ATATTCTTTA TCAGGCAAGC ATGTTAGGGC GCGACCTCAC ATCGTACTAT
GAGAACGGAC AGCTTATTAT ACAAAATATT TTTGAAAGCC GTTCGGAAAT AATAAGACAG
ACCAGATACG GGTTTAAGCC TGAAAGCCTG GAACTCGAAA TCCCGAGTCT TATAGAATTA
ATACATGAAG GAACGGAATG CCTCGTTATT GATAACATAG GTACCTTTGC TCTCAGGATT
TCCATAAAAA AGCTCAGAGA CCAGTTTGAT GCGCTAAACT ACATGGTAAG GAAAAAAGGC
TGTACAGCTC TTTTAATAAT GGATGATTCC GCACACAAGA TGACTTACCA GCTTGCTGAA
TACTCGGTCT ATGGGTCTAT TCACCTGTTA GTAAGGGAAA ACTCGTATCT TGGAAAAATG
GAGCGCTACC TGAGCATACC CAAGATGCGT AGTACCCCTA TTTCCCCTGA AATGTCTATT
TTTGAAATCA CATCTGAAGG TATCAAAATT CGTGAGTCTG GGGGATGA
 
Protein sequence
MERVSTGIED LDRKLSGGYP ANKVTLITGI AGSGKTIFGI HFVYKNCLEG RKCMIIATEE 
SPEDILYQAS MLGRDLTSYY ENGQLIIQNI FESRSEIIRQ TRYGFKPESL ELEIPSLIEL
IHEGTECLVI DNIGTFALRI SIKKLRDQFD ALNYMVRKKG CTALLIMDDS AHKMTYQLAE
YSVYGSIHLL VRENSYLGKM ERYLSIPKMR STPISPEMSI FEITSEGIKI RESGG