Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3108 |
Symbol | |
ID | 3625317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3996007 |
End bp | 3996714 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637701946 |
Product | hypothetical protein |
Protein accession | YP_306575 |
Protein GI | 73670560 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.10072 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.443629 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAGGG TTTCAACAGG CATAGAGGAT CTGGACAGGA AGCTGAGTGG GGGTTATCCT GCAAATAAAG TAACCCTTAT AACCGGTATA GCAGGAAGCG GGAAAACAAT CTTCGGAATC CATTTCGTAT ATAAAAACTG TCTTGAAGGC AGGAAATGTA TGATTATCGC AACTGAGGAA AGTCCTGAAG ATATTCTTTA TCAGGCAAGC ATGTTAGGGC GCGACCTCAC ATCGTACTAT GAGAACGGAC AGCTTATTAT ACAAAATATT TTTGAAAGCC GTTCGGAAAT AATAAGACAG ACCAGATACG GGTTTAAGCC TGAAAGCCTG GAACTCGAAA TCCCGAGTCT TATAGAATTA ATACATGAAG GAACGGAATG CCTCGTTATT GATAACATAG GTACCTTTGC TCTCAGGATT TCCATAAAAA AGCTCAGAGA CCAGTTTGAT GCGCTAAACT ACATGGTAAG GAAAAAAGGC TGTACAGCTC TTTTAATAAT GGATGATTCC GCACACAAGA TGACTTACCA GCTTGCTGAA TACTCGGTCT ATGGGTCTAT TCACCTGTTA GTAAGGGAAA ACTCGTATCT TGGAAAAATG GAGCGCTACC TGAGCATACC CAAGATGCGT AGTACCCCTA TTTCCCCTGA AATGTCTATT TTTGAAATCA CATCTGAAGG TATCAAAATT CGTGAGTCTG GGGGATGA
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Protein sequence | MERVSTGIED LDRKLSGGYP ANKVTLITGI AGSGKTIFGI HFVYKNCLEG RKCMIIATEE SPEDILYQAS MLGRDLTSYY ENGQLIIQNI FESRSEIIRQ TRYGFKPESL ELEIPSLIEL IHEGTECLVI DNIGTFALRI SIKKLRDQFD ALNYMVRKKG CTALLIMDDS AHKMTYQLAE YSVYGSIHLL VRENSYLGKM ERYLSIPKMR STPISPEMSI FEITSEGIKI RESGG
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