Gene Mbar_A3053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3053 
Symbol 
ID3624850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3931389 
End bp3932042 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content43% 
IMG OID637701894 
Producthypothetical protein 
Protein accessionYP_306524 
Protein GI73670509 
COG category[S] Function unknown 
COG ID[COG5423] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0424706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.600714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAACG ACGAAAACTA CAGAAAACTG GAAGAAAAAG CAAAAGAACT GGGGGCAAGT 
AACATAAGGC TCATTCCAGC AGTGGACATC GTGGTTGAAG ACCGAACTGT TTTAAAGTGC
ATTTTCGGAT GCAACGGTTA TGGAAGCCGA GTGTGCCCTC CCTTCGTCCC TACAGTAGAT
GAGTTTAAAA AGATGCTTGC AGATTACGAA TGGACTCTTC TTGTCGAATG GAAATCAGAT
AATATTTTTT CCCGGGAAGC CAGTGAGAAT TTCTTGAAAT ACTCCGTCGA ACCTCCCAAA
GACGAGACTG TAAAACAACA GTTCCAGAAC AACATGAAAA CAATAATGAA AGACCGTAAA
GAGATAATTC AGCCCGGAGT CCTGGAGCTT GAAAAACTTG CCTGGACCCT TGGCTATAAT
ACTGCTCTTG CAACCTTTCC AGGCATGTGC ACATGGTGTG CAACAAGCGA CTACTCAAAT
GTAAATTGCG CCAGGGATAA AGGGCCATGC CATCATCCAA CTCTCCGCAG GCCATGTCTT
ATGGGACTTG GTATCAGGAT GGATAAAACC CTCGATAGAC TCAACACTCC ACTACAGAAA
TTTCCCTTAA ATAATACTGC ACCTTCACCT TATACCCTAA TATTACTTGA CTGA
 
Protein sequence
MINDENYRKL EEKAKELGAS NIRLIPAVDI VVEDRTVLKC IFGCNGYGSR VCPPFVPTVD 
EFKKMLADYE WTLLVEWKSD NIFSREASEN FLKYSVEPPK DETVKQQFQN NMKTIMKDRK
EIIQPGVLEL EKLAWTLGYN TALATFPGMC TWCATSDYSN VNCARDKGPC HHPTLRRPCL
MGLGIRMDKT LDRLNTPLQK FPLNNTAPSP YTLILLD