Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3053 |
Symbol | |
ID | 3624850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3931389 |
End bp | 3932042 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637701894 |
Product | hypothetical protein |
Protein accession | YP_306524 |
Protein GI | 73670509 |
COG category | [S] Function unknown |
COG ID | [COG5423] Predicted metal-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0424706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.600714 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAACG ACGAAAACTA CAGAAAACTG GAAGAAAAAG CAAAAGAACT GGGGGCAAGT AACATAAGGC TCATTCCAGC AGTGGACATC GTGGTTGAAG ACCGAACTGT TTTAAAGTGC ATTTTCGGAT GCAACGGTTA TGGAAGCCGA GTGTGCCCTC CCTTCGTCCC TACAGTAGAT GAGTTTAAAA AGATGCTTGC AGATTACGAA TGGACTCTTC TTGTCGAATG GAAATCAGAT AATATTTTTT CCCGGGAAGC CAGTGAGAAT TTCTTGAAAT ACTCCGTCGA ACCTCCCAAA GACGAGACTG TAAAACAACA GTTCCAGAAC AACATGAAAA CAATAATGAA AGACCGTAAA GAGATAATTC AGCCCGGAGT CCTGGAGCTT GAAAAACTTG CCTGGACCCT TGGCTATAAT ACTGCTCTTG CAACCTTTCC AGGCATGTGC ACATGGTGTG CAACAAGCGA CTACTCAAAT GTAAATTGCG CCAGGGATAA AGGGCCATGC CATCATCCAA CTCTCCGCAG GCCATGTCTT ATGGGACTTG GTATCAGGAT GGATAAAACC CTCGATAGAC TCAACACTCC ACTACAGAAA TTTCCCTTAA ATAATACTGC ACCTTCACCT TATACCCTAA TATTACTTGA CTGA
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Protein sequence | MINDENYRKL EEKAKELGAS NIRLIPAVDI VVEDRTVLKC IFGCNGYGSR VCPPFVPTVD EFKKMLADYE WTLLVEWKSD NIFSREASEN FLKYSVEPPK DETVKQQFQN NMKTIMKDRK EIIQPGVLEL EKLAWTLGYN TALATFPGMC TWCATSDYSN VNCARDKGPC HHPTLRRPCL MGLGIRMDKT LDRLNTPLQK FPLNNTAPSP YTLILLD
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