Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3037 |
Symbol | |
ID | 3624834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3911554 |
End bp | 3915423 |
Gene Length | 3870 bp |
Protein Length | 1289 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637701879 |
Product | hypothetical protein |
Protein accession | YP_306509 |
Protein GI | 73670494 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.203236 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.672387 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCTT TTAACCTTCC AGATAAGAAT GAGCTGGAGA TCCAGATGCA AAAACGGATC ATTGAACTGG AAAAAGCTAA TCAAGAATTA TCTGCCAGGA ATCTGGCACT GAACCAGGAC ATCACCAATT ACAAGAGGAC CGAAGAAGCA TTGAAGCTTA CACAGGCCTC TGTTGACCTG GCATCGGATG GTATCTTCTG GATTACTGAT GGCGGGAAAA TAATTTATGC GAATGATGCT GCCTGCAAGT CACTGAACTA CTCCTGGGAC GAGCTCCAGG GAATGCATGT GTGGGACTTT GACCCGTTAT ACACCAAAGA AGTATGGCTG GAACACTGGG TGAAGATCAA GAAGCGAGGC TCATTCACTT TTGAGACCCT CCACCATACC AAGGATGGGA GAGAGTTCCC GGTGGAGGTG TCGGTAAACT ATGTTCGATC CTGTGATATG GAGTTCAACT TCGCCTATGT CAAGGATATC ACCGAGCACA AACAAGAAGA TTACAGGATA AGTAGATACA ACAATATTCT GAAAGGAATT AACCGAATCT TCAGCAGTGT AGTAAAGGCA GAAACAGAAG AAGAATTGGG AAATTCCTTC CTATCTGTGG CTATAGATAT AACTGGCAGT CAATTTGGTT TTGTTGGAGA AGTGGGAGCT GATGGTCTAC TACATGATAT TGCAATCAGT GATATGGGGT GGGACCAGTG CCTGATGTAT AACAAGACAG GACATCGCCG TCCTCCAGGA GATTTTGTTC TTCACGGCCT TTATGGACAT GTAGTCGACA GCGGGAAAAG CTTCTTTACC AATGAGCCGT CATCGCATCC AGATAGTATT GGCCTGCCGA AGGGTCATCC ACCTTTGATA TCGTTTTTAG GCACACCTCT CATTTTAGAT GGAAAAACGA TAGGTATGAT CGCAGTTGCA AACCGCGAGG GCGGCTATAG CTTGGAGCAG CAAGAGGATC TTGAATCTAT TGCGCCGGCA GTGGCACAGG CCCTGGAGAA GAAAAGAGAT GAACAGGAAC GTGCAAGGGT AAAAGAGGCA CTAATTAGAA GAGAAAACGA GTTTCGAACA TTGGCTGAAA ATTCTCCTGA TGTTATATTC CGCTTTGATA GACAAAACCG TCATTTATAT GCCAACCCTG CTGCTGCCGA AGTATATGGC TATTCTCAGG AAGAAATTAT TGGGAAAAAA CATAGCGAAC TAGGAAAATA TCCTGAACAG ACAAAATTCT GGGAAAGGCA TAATCAGAAA GTTTTTGCTA CAGGGCAATC CGAAACAATT GAATTTCGTT ATATCTCGCC TCAGGGAAAA GAATACTATT TTAATACATT AATAGTACCA GAATTCACAA ACTGCGAAGT TACTTCCGTT CTTGCTATCT CCCGTGATAT TACAAAGATG AAACAAGCAG AAGCTAAACT GAAAGATACG CTTGATAATT TAGATAAATT GGTTAAAGAA CGTACATCAG AACTTCAGAA AGCTTATGAT TCATTGAAAA AGAGTGAACG AAATCTTGCT AAAGCTCAAG AAATGGCCCA TATTGGAAGC TGGGAACGGG ACTTTGCGAG TAATGAACTT CATTGGTCTA ATGAAACGTA TCGTATTTTT GGACTTAAGC CTCAAAAATC AAAAGTAAAT TATGATACCT TCTTAAATTA TATACATCCA GATGATCAAG ACTATATAGA TAATGCCGTT AAAGAAGCAT TAAAAGGAAA GCTTTTTGAG ATTTATTACA GGATTATCAC AGCTAGTGGA GAAGAGCGCA TAGCCCATTC TAAAGGTGAA ACTGTTTTCG ATAAGGAAAA TAATCCTGTC CAGATTAGAG GGACAACGCA AGATATAACA GAGCGTAGGA AAGCTGAAGA AAGGATTCAA AATTTAGCCA AAATTGTAGA ATCATCAACT GACGCTATCA TAACCAAGTC TTTTGAAGGT ATTATCAAAA GTTGGAACAA GGGAGCAGAA CAAGTTTATG GTTATTCAGC GGAAGAAGTC CTGGAAAAGC CCATATCCGT TTTGGAGCCG TCCACATTAA CCGGAGAAAC ACAAAGATTG AGTGAAATAA TTAAACGGGG AGAAAAGATC CAGCAATATG AAACCTTAAG ATTGAGAAAG GATAGGAAGA TAATAAATGT TTCACTTAGT ATTTTTCCAA TTTTTGATAG CCAAGGAAAG ATAACCGCTG CCTCCGTCAT TGCCAGAGAT ATAACCGAAA GAAAAAGAGC AGAAGAAAAA CTTCGGGAAA GTGAGGAAAA GTACCGCAAT ATTGTAGAGA CAGCAAACGA AGGTATACTC TTAATTGATG ATGAAGCCGT AATCACCTAT GCCAATAAGA AAATAACAGA TATGCTCGGA TACACTCTGG AAGAAGGTAT TGGCAGACCG GTATTGGACT TTGCCGATGA AGAAGGTAAA ACTATCCTCA AACAGAATCT GGAAAAAAGG CAGCAGGGGA GCAATGAGAG TTACGAATTA AAATTAATAT GTAAAGATGG CTCATACCTA TGGGCACTCA TAAATGCTAA ATCTCTTTTT GATAAAGATG GAAAGTTTAC GGGCGTGATG GTCATGCTTA CTGACATTAC CAAGCGCAAG CGAGAAGAGC ACCGGATTCG TAGATATAAC CGTATTCTTG AAGGGATTAA TAAGATCTTC AGTAATGTGG TGCAGGCAAA GACAGAAGAA GAACTGGGAG AAGCATGTCT ATCTGTAGCC CTGGAAGTGA CCGGCAGCGA GTTTGGTTTC ATTAATGAAA TTGGCACCGA TGGACTGCTG CATGATGTTG CAAAAAGCGA GCTCGTATGG GAACAGTGTC GCATGTGCGA CAAGACCGGG CATCTTACTC TTCCAAGAGA TTATGGTGTC CATGGTCTGT ACGGCAACAT CATCGTCAAT GAGAAAGTTT TCTTTACCAA CGAGCCGTCA TTGCATCCAG ATAGTATTGG CCTGCCGGAG GGTCATCCAC CTCTAACGTC ATTTCTTGGT GCACCCTTTA TTCAAGATGG AAAAACGATC GGCATGATTG CAGTCGCAAA CCGCCATGGA GGTTATAGTT TCGAGCAACA GGAAGATCTC GAGGCTATCG CGCCGGCAGT GATGCAGGCG CTGCAGAGAA AAAAGGCGGA AAAATTTCTA GCAGAGATTG CGATTTCCCG CAAACAGGAA ATCCATCATC GGATTAAAAA TAATCTTCAG GTAATATCTT CCTTGCTGGA TTTACAGGCT GAAAATTTCA ATAACAGGGA GGATATTAAG GATTCGGAAG TTCTAAAAGC CTTCAGGGAA AGTCAGGATA GAGTAATATC TATGGCTTTG ATCCATGAGG AATTGTATAA AGGTGGAGGG TTCGATACAC TGAACTTTTC GTCATACATC GAGGAACTCG CTGAAAATCT TCTCAAGACT TACAGGCTTG GAAATGCTGA TATCAGCTTA GACATGGATC TTGAAGAGAA CATTTTCTTT GACATGGATA CTGCAGTACC TTTAGGAATT ATTGTTAACG AGCTCGTCTC CAATTCTCTC AAACATGCAT TTCCCAACAG AAATGAAGGA GAAATCTGTA TAAAACTGCA TAGAGAAGAA AATGGAGAAC ATATTAACAG CATAAAAAAG GATCTTAGTA CGGGCAACAC GTTTAATTTG GCCATTTCGG ATAATGGGGT GGGTATACCT GAAGACCTCG ATATCGAAGA GCTTGGTTCT CTTGGCATGC AGCTCGTGAC TTCACTTGTC GCCCAGTTAG ATGGTGAACT TAAGCTTAAA AGAAATAACG GTACAGAATT CATTATTAGG TTTACAGTAA CAGAAAATAA TAGTCAGGAA TTAATGCCAG CTCTGCATTT AAATGAATAA
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Protein sequence | MTAFNLPDKN ELEIQMQKRI IELEKANQEL SARNLALNQD ITNYKRTEEA LKLTQASVDL ASDGIFWITD GGKIIYANDA ACKSLNYSWD ELQGMHVWDF DPLYTKEVWL EHWVKIKKRG SFTFETLHHT KDGREFPVEV SVNYVRSCDM EFNFAYVKDI TEHKQEDYRI SRYNNILKGI NRIFSSVVKA ETEEELGNSF LSVAIDITGS QFGFVGEVGA DGLLHDIAIS DMGWDQCLMY NKTGHRRPPG DFVLHGLYGH VVDSGKSFFT NEPSSHPDSI GLPKGHPPLI SFLGTPLILD GKTIGMIAVA NREGGYSLEQ QEDLESIAPA VAQALEKKRD EQERARVKEA LIRRENEFRT LAENSPDVIF RFDRQNRHLY ANPAAAEVYG YSQEEIIGKK HSELGKYPEQ TKFWERHNQK VFATGQSETI EFRYISPQGK EYYFNTLIVP EFTNCEVTSV LAISRDITKM KQAEAKLKDT LDNLDKLVKE RTSELQKAYD SLKKSERNLA KAQEMAHIGS WERDFASNEL HWSNETYRIF GLKPQKSKVN YDTFLNYIHP DDQDYIDNAV KEALKGKLFE IYYRIITASG EERIAHSKGE TVFDKENNPV QIRGTTQDIT ERRKAEERIQ NLAKIVESST DAIITKSFEG IIKSWNKGAE QVYGYSAEEV LEKPISVLEP STLTGETQRL SEIIKRGEKI QQYETLRLRK DRKIINVSLS IFPIFDSQGK ITAASVIARD ITERKRAEEK LRESEEKYRN IVETANEGIL LIDDEAVITY ANKKITDMLG YTLEEGIGRP VLDFADEEGK TILKQNLEKR QQGSNESYEL KLICKDGSYL WALINAKSLF DKDGKFTGVM VMLTDITKRK REEHRIRRYN RILEGINKIF SNVVQAKTEE ELGEACLSVA LEVTGSEFGF INEIGTDGLL HDVAKSELVW EQCRMCDKTG HLTLPRDYGV HGLYGNIIVN EKVFFTNEPS LHPDSIGLPE GHPPLTSFLG APFIQDGKTI GMIAVANRHG GYSFEQQEDL EAIAPAVMQA LQRKKAEKFL AEIAISRKQE IHHRIKNNLQ VISSLLDLQA ENFNNREDIK DSEVLKAFRE SQDRVISMAL IHEELYKGGG FDTLNFSSYI EELAENLLKT YRLGNADISL DMDLEENIFF DMDTAVPLGI IVNELVSNSL KHAFPNRNEG EICIKLHREE NGEHINSIKK DLSTGNTFNL AISDNGVGIP EDLDIEELGS LGMQLVTSLV AQLDGELKLK RNNGTEFIIR FTVTENNSQE LMPALHLNE
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