Gene Mbar_A3020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3020 
Symbol 
ID3624667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3888912 
End bp3889658 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content45% 
IMG OID637701864 
Productcarbonic anhydrase 
Protein accessionYP_306494 
Protein GI73670479 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.510523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0779856 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTCA ACAAGCAGAC CTTTACAATA CTTATTCTAT CTCTTTCACT GGCCCTTTTA 
GGAAGCGGAT GTATCTCCGA AGGTGAAGGA GCAGAGGGAA ATGTCACACA GGGAATAACC
GAGAGCGAGT TTTCTAATAT CAGGGAAAAT CCGGTAACAC CATGGAATCC CGTACCTGTA
GCACCCGTCA TTGATCCCAC AGCTTTTATT GATCCCCAGG CTTCAGTAAT AGGAAACGTG
ACAATAGGTG CCAGTGTTAT GGTTTCCCCA ATGGCATCTA TTCGGAGTGA TGAAGGAATG
CCAATTTTCG TAGGAGACAG GAGCAATGTA CAGGACGGAG TTGTGCTTCA TGCCCTTGAG
ACAATCGATG AGGAAGGTGA ACCTGTAGAA AATAACATTG TTGAAGTTGG CGGCAAGAAA
TACGCAGTCT ATATAGGAGA AAATGTTTCA CTTGCCCACC AGGCCCAGGT TCATGGTCCA
GCTTCTGTAG GCAACGATAC TTTCATTGGT ATGCAGGCTT TTGTTTTTAA GTCAAAGATA
GGAAACAACT GCGTACTTGA ACCAACGTCG GCAGCAATTG GTGTCACTGT TCCTGATGGT
AGGTATATCC CAGCAGGTAT GGTTGTCACT TCCCAGGCCG AAGCGGATAA TCTGTCAGAA
ATTACTGACG ATTATGCATA TAAGCATACT AATGAAGCCG TAGTATATGT AAACGTCCAT
CTGGCCGAGG GATACAACAA AGCCTAA
 
Protein sequence
MRFNKQTFTI LILSLSLALL GSGCISEGEG AEGNVTQGIT ESEFSNIREN PVTPWNPVPV 
APVIDPTAFI DPQASVIGNV TIGASVMVSP MASIRSDEGM PIFVGDRSNV QDGVVLHALE
TIDEEGEPVE NNIVEVGGKK YAVYIGENVS LAHQAQVHGP ASVGNDTFIG MQAFVFKSKI
GNNCVLEPTS AAIGVTVPDG RYIPAGMVVT SQAEADNLSE ITDDYAYKHT NEAVVYVNVH
LAEGYNKA