Gene Mbar_A3002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3002 
Symbol 
ID3626664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3865594 
End bp3866298 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content38% 
IMG OID637701846 
Producthypothetical protein 
Protein accessionYP_306476 
Protein GI73670461 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.407926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0038842 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTATGT ACTATAGTGT ACAGATTATG ACAATTGTAT ATCCTGATAT CAAGCCATGG 
GGACGGTCTT TCAAAGAATA TGTCAGAATG TTTAACTTAA CACCTGATGA TCTCGAGCGA
AAGATCCTGG GCTGTGGAGA CGGACCTGCA AGCTTCAATG CAGAGTTTAC AGAACGAGGC
GGAAATATCA TATCAGTTGA CCCTGTCTAC TTTTTCAGTG CTGATCAGAT TAGACAGAGA
ATTCATGAAA CCTATAATTA TATCATTGAC CAGACCCGGA AAAACCAGGA TAAATTTATC
TGGCAAGAAA TTGGCTCAGT TGAAGAACTC GGAAGGATAA GGATGTCGGC TATGGAGAAA
TTTCTAAAAG ATTTTTCGGA AGGCGTGATG CAAAAAAGAT ATATACCGGG TGAACTGCCC
TTTTTGCCTT TTAAGGATAA AGAGTTTGAT CTGGCATTGT GCTCGCATTT ATTATTTCTC
TATACAGATA ACCTGTCACT GGAGTTTCAT TTAAAATCGA TAGAGGAGTT GTGCAGGGTT
TCAAATGAGG TAAGAGTATT TCCGTTACAA GACGTAAACG CCGACCGATC ATCATATGTT
GAGCCTGTAA TCAATTTTTT ACGGACAAAA AACCAAGATG TAAAGGAAAT AAAGGTAGCA
TACGAATTTC AAAAGGGTGG AAATACAATG TTAAGAATTT GTTGA
 
Protein sequence
MSMYYSVQIM TIVYPDIKPW GRSFKEYVRM FNLTPDDLER KILGCGDGPA SFNAEFTERG 
GNIISVDPVY FFSADQIRQR IHETYNYIID QTRKNQDKFI WQEIGSVEEL GRIRMSAMEK
FLKDFSEGVM QKRYIPGELP FLPFKDKEFD LALCSHLLFL YTDNLSLEFH LKSIEELCRV
SNEVRVFPLQ DVNADRSSYV EPVINFLRTK NQDVKEIKVA YEFQKGGNTM LRIC