| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2943 |
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| Symbol | |
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| ID | 3626142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 3778053 |
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| End bp | 3780443 |
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| Gene Length | 2391 bp |
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| Protein Length | 796 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637701788 |
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| Product | hypothetical protein |
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| Protein accession | YP_306418 |
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| Protein GI | 73670403 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG5270] PUA domain (predicted RNA-binding domain) |
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| TIGRFAM ID | [TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00440971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCAGCAGA AAAAACAGAA AAAAGAAAAA ATCCAGGTTT CGGGCCCACA AAGAACAGAT
AAAGGTTATC AGGGCACAAA GAAAGCCCGG ACTTCGGATA AAAGAACCTC CCAAATTACG
GATAATAAAG TCTCCCGAGT TTCGAACAAT AAAGCTTCCA GAACCCCGGA TAATAAAGTC
TCCCGAACTT CGGATAATAA AGCTTCCAGG ACTTCGGATA GAAAAAACTC TCCGACCCGG
CAAAGCAGGG TAAAAAACAA ATCTCCAGGT TTTAAAGGAA AGCCTTCTGA GAGAAAACAC
ACTTCCAGCA AAAGCGCTGG CTATAAAGGA AATCAGGACT TGGTCCCCGC GAAGAAAAAG
AACGTCAAGC GTTTCGAGTA TGAAGACGAT AAAATTTTCT GGTGCGGAAA ATGTAACCTT
CCCCTGATAG GGGAAGAATG TGGAATATGC GGCAACAAAG GAAAAGTCCT TCAGCTCTCC
CAACCTGCTG ACGTCCGTTT TTGTTCTCCT TACGAGCGAG AAGTCTTGGA CAGGCAGCTT
TGCTCAGCTT TTGGCTGCAA TCCCCTTGAA GATAAGCTCA TTCTTCTAAA CAAAGTCCCT
GGTGAAGACA AAACTGATGA AGTACTCGTA GATGGCTTTA TTTTTGGAAT TCTCCGGTTT
GAGCTTTCAA AAATGGATTA CAGTTTTGAA CCTTCCCTCC AGGGTGCAAA AATTCTCCTG
AAATATGCCA AAGGCAGGAA AGTCGAGCTT AAGAAAACAA ACCGACACCT TAACGGAAAA
AGTGTCACAG CAGAATCTGT TGAAGCCTTC GACAGTAATA TAAAAGCCGG TGACTTTGTG
CTTGTTACCG TAGGCAGCCT GACAGGCTAT GGAGTTTCTT TAGTTGACAG CACGGACTTT
TCGGACCTGA AAAACCTGCC TGAGCCTGAG AATCGGACTG AATTGGAATT TTCAAGCGGA
CCCAGGACAA AAGTGGAATC TTCAAGCGAG GCCAGGATAA AAGTTCTCAG GATCAGGAAG
GTTGACAGCA GTGAAGCATC ACTTTGTCCT GAGACTCCAG ATCTTGCGGC ATGCATAAAG
GCAAACAAAA AACATCTCCA GGTGCTTGGG AAGAACGCAA TTAATACTAT TCGCGGGATT
ATTTCCAGGA AAGAACACAA AAACCTGCCT GTCTATGTCT CCTTCAGCGG CGGAAAAGAC
AGTCTTGTAG TGCTTGACCT AGCACGGTCT TCCCTTAAGC AAAGGGAGCT CAAAGCTTTC
TTCCTGAACA CCGGGATTGA GTTTCCGGAA ACTGTTGAGT TTGTACGAAA CTTTTGCCGG
GAAAGGGAAA TTCCACTCGT CGAGGCAAAT GCAGGTTCCA CCTTCAGGGA ACAGGTAGGA
AAATTCGGGC CTCCTGCAAA GGATTTCCGC TGGTGCTGTA AGGTCTGTAA GCTGGCATCG
GCAGGGGACT TCGAGCTAGG AAAAGGAGCA TCTTCTCAAA AAGGGGCAAT TGGCGGCGTG
GCTTATCTCA CAGTTGACGG CAAGCGCAAG CACGAATCTT TCTCAAGGGC AAGGATTGCG
GCAAGTGAGA CAAATCCTTT TGTCCCGGCC CAGCTTAATA TCTTTCCCAT AAGGGATTGG
AAAGCAATTG AAGTATGGCT TTACATACAC TGGCGACAGC TTCCCTACAA TCCTCTCTAT
GACCTTGGCT TTGAAAGAGT AGGCTGCTGG CTTTGCCCGT CTGCCCTTGC TGCCGAATAC
GCCAGGGTAA AAGACCTGCA CCCTGAAATG TATGCGAAGT GGAACGCTTT TCTGCTGAAA
TGGGCAGAGT CCAGAGGACT TTCCGAAAAA TTCGTAGAGC ACGGGTTCTG GCGCTGGAAA
GAACTGCCTC CCAAGATGTT AAAACTGGCC GAAGAGTTAG GGATTTCCGT GCTTGCTAGA
GAAAAAACTG AAGACTTTGA AATTGAAGTC GTGTCAGGAA TTTCTCCCTG CCGGGCAGGC
GGCTATTCAA TAGAAGCAGC TGTGAAAGGC ATCAGGGAAA AAGAAGCTGC GGGTTTTATC
AATGTTCTCG GAAACACGGT TTATGCGGAA GACCTGGGGA TGTTGCTAGT CAAAACCGGA
ACCGGAACTG TAAAGTTTTT TTCGAATGGG AATCTGCTTG CAAGTTCGGA AACAAAGGAA
AAAGCGGTTT CGCTTTTTAA GGAAGCTGCA AAGCAGTTTA TAAGGCTTTC CCGCTGTACC
GGATGCGGGA TCTGTGTAAA AGCTTGTCCT GTAGGGGCAG CTTCTCTCGA AGGAAAAACG
CCGCATGTGA GTGAAGCCTG TATCAGGTGC GGAAAATGTA CAGAGTCCTG TGTGGTAACA
CGATATTTTG ATAAGCTAGT ACCTGATCTG AATCAAAAGT TAAAGGTGTG A
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| Protein sequence | MQQKKQKKEK IQVSGPQRTD KGYQGTKKAR TSDKRTSQIT DNKVSRVSNN KASRTPDNKV
SRTSDNKASR TSDRKNSPTR QSRVKNKSPG FKGKPSERKH TSSKSAGYKG NQDLVPAKKK
NVKRFEYEDD KIFWCGKCNL PLIGEECGIC GNKGKVLQLS QPADVRFCSP YEREVLDRQL
CSAFGCNPLE DKLILLNKVP GEDKTDEVLV DGFIFGILRF ELSKMDYSFE PSLQGAKILL
KYAKGRKVEL KKTNRHLNGK SVTAESVEAF DSNIKAGDFV LVTVGSLTGY GVSLVDSTDF
SDLKNLPEPE NRTELEFSSG PRTKVESSSE ARIKVLRIRK VDSSEASLCP ETPDLAACIK
ANKKHLQVLG KNAINTIRGI ISRKEHKNLP VYVSFSGGKD SLVVLDLARS SLKQRELKAF
FLNTGIEFPE TVEFVRNFCR EREIPLVEAN AGSTFREQVG KFGPPAKDFR WCCKVCKLAS
AGDFELGKGA SSQKGAIGGV AYLTVDGKRK HESFSRARIA ASETNPFVPA QLNIFPIRDW
KAIEVWLYIH WRQLPYNPLY DLGFERVGCW LCPSALAAEY ARVKDLHPEM YAKWNAFLLK
WAESRGLSEK FVEHGFWRWK ELPPKMLKLA EELGISVLAR EKTEDFEIEV VSGISPCRAG
GYSIEAAVKG IREKEAAGFI NVLGNTVYAE DLGMLLVKTG TGTVKFFSNG NLLASSETKE
KAVSLFKEAA KQFIRLSRCT GCGICVKACP VGAASLEGKT PHVSEACIRC GKCTESCVVT
RYFDKLVPDL NQKLKV
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