Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2935 |
Symbol | |
ID | 3626520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3764294 |
End bp | 3766972 |
Gene Length | 2679 bp |
Protein Length | 892 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637701780 |
Product | sensory transduction histidine kinase |
Protein accession | YP_306410 |
Protein GI | 73670395 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0108419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0385268 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTATGG AAAATGAAGA AAACTGGATG GCCGAATTTA TATTAAATAG CCCTGGCCCT GTCCTGCGAA TAGGAAAAAA AGGAACGGTT CTTTATGCAA ATAAAACAGG AAAATCCTTA CTTGAAGCTC TAAATAGTAG AATTGGAGAA AAAGCTCCTG ATGAAATCCT TAAACCTGCC CGACGAGTAG TAATCCAAAA GATACCCGCA CAGACCGAAC TGAAAGTAGA CGATAAAATT TATTCAATCA TTTTTACCCC CTTACTCGCC TTCGAAGGTA CGATTCTCTC TGCATTCGAG GTCACATCCC TTAAACAAGC CAAAGAGAAA CTACTTTTTA GGCAAAAAAA GTATAAAGTG CTTTCCCAAA TTTCCGAGTT ATCTCTCAAG ACCTCAGATT TTCAGGCTCT TCTTGATCAA ACCCTGCCTC TGGTTGCAAC TGCTGTTGGC GCAGAATACT GTAGCGTCCT GAAACTCTTG CCTGATGGAG ATTTTATATT TGAGACCGGA GTCGGCTGGA AGCCAGAGAA TATAGGCAGG ATCATAAAAA AAGATTCAGC TTCAAGAGCA GGCTACACTG TGCTTTCAAG CCGGACGATT ATGTTAGAAA AGCTGGATAA GAATAACTCC ATCAGGACAA TGGGCCTCGA AGAAAACCAG GATATTATTA GTGGAATCAG TGTGCTCATG GGAACTGTTG AAAAACCCTA TGGAGTTCTT ATGGCTCACA GCACGAAAAA GGAAAAATTT TTCGAGGAAA ATGCCTGTTT CCTGAGTGCA ACTGCAGTAA TTTTTTCATT TGTGATTCAA AGAAAAAAAG TGGAAGCTGC ACTCCAGGAC AAAGTGTATT TCCTGGAAAC GCTGCTGGAT ACAATTCCGG CCCTCGTGTT TTATAAGGAT AGAAAAGGTA TTTATCAGGG ATGTAACGAG CTCTTTGCAA AAATGATTCT CGGAAGTTCA AAAGAAAGAA TAGCCGGACA CTCTATATAC GACCTTTTTA AAGCAAGTTC TCCAGAACTC GAGGATATTC CAGAACTCGA GGATGCTTAT GAAAGAATGG ACAAGCAGCT GTTCCAGAAG GGAGGAAGCC ATGCTTACGA GGCCAAAGTG GTGTGCTCTG ATGGACTCAG AAGGGACTTC ATTTTCAATA AGGCTATATA CAAAAGTTTC TGCGGGACTG TAGAAGGACT TATAGGAGTA ATGCTTGACA TTACGGGACG CAAAAAAACA GAAGAAAAGC TGCAAAAAAG TGAGGAGAGA TACCGCATTA TTGCGGAACA GACAGGACAA CTGATATATG ATATTGACCT GAAAAATGGT CTTGTTGAGT GGGCGGGAGC AGTTAATGAA CTCACAGGTT ACAGCAATAA AGAAATTGAG AATCTTGATT TTTACGATTG GCTCGAGCAT ATTCATTCGG AAGATTACAG AAGAGTGCAG CAGACATTGA AAAATTGCTG GAACACAGGA GAAAAATTCA ATGAAGAATT CAGGTTCAAG CGAAAGGACG GAAGCTATAT TTTTGTAAAA AATAAAGGAG TATATTTGCG AGATGACGAA GACTTTATAT GCCGGGCTCT AGGGGTAATG GAAGACGTTA CCGAGATCAA ACAGTCTTCA GAAAAACTGA GAGAAAGCGA AGAACTCTAC AGGTCATTTT TGCAGAATTT CAAAGGAATT TCATTTAAGC TGGGTCCCGA TTTTACCCCA CTTTTAATGC AGGGAGCTGT GGAGGAAATA ACAGGGTACA TAGAAGATGA CCTCACTTCC GGCCGAATAA AACTGATTGG TCTCATTAAT CCTGAAGATA TGAAAATGCT CGAGAAAAGT ATGGAAAAAA TGAATTCATC ACCGAACTCT ATCAGGGAGT ATGATTACAG GCTCAAGAGG AAAGACGGAA GTGTAAGATG GATCCACGAG CTAATCCACA ATGTTTGTAA TGCTTCGGGA GAAACCATGT TTATTCAGGG GTATGCTTAT GACATTACCC AGAGGAAAAA AGCTGAGGAG ACTCTTGAGA AAGCCGAGAA AATTGGCATG AGAGAGACCC ATCATCGGAT TAAAAATAAC CTTCAAATAG TTTCTTCCAT GCTCAGCCTT CAGGCTGACA AGTTCAAAGA CAAGGAGGTT ATTGAGGCCT TCAGGGAGAG TGAAAACCGT GTGATTTCCA TGTCCATTAT TCATGAAGAA CTTTATAAGT CAGAGGATGT GGCAAGTATT GATTTTGCAG CATACCTCCG AAAACTGACT GCGGACATTC TGCACTCTTA CAGGATCGGA AATGAGAAGG TCAAGCTTAT CCTTGAGGTG GACAGTACAC TTTTTGGAGT TGACACTGCC ATTCCACTGG GAATTATAAT TAATGAACTT TTCTCAAACT CTCTTAAGTA TGCGTTTCCA AAAGATGTAG AAGGAAAGAT CAGGATTTCC CTCTCCCGAA ATGATGTTGA ATGTCAAAAA ACAGGAGAAG CAACAGAAAC TAATTTTCCA GAGTTGCCTT CCAGTTTTAC TCTTGTCTAC TCGGACAACG GGGGCTATTT TCCAGAAAAA GTGGATTTCA AAAATTCGAA AACCCTGGGT TTGCAACTTG TAAATGCTCT CGTTGAACAG ATTAATGGAA CAATTGAGCT TGAAAGAGGG AATGAAACAA AATACACTAT CAGATTTGAA GATAAATGA
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Protein sequence | MGMENEENWM AEFILNSPGP VLRIGKKGTV LYANKTGKSL LEALNSRIGE KAPDEILKPA RRVVIQKIPA QTELKVDDKI YSIIFTPLLA FEGTILSAFE VTSLKQAKEK LLFRQKKYKV LSQISELSLK TSDFQALLDQ TLPLVATAVG AEYCSVLKLL PDGDFIFETG VGWKPENIGR IIKKDSASRA GYTVLSSRTI MLEKLDKNNS IRTMGLEENQ DIISGISVLM GTVEKPYGVL MAHSTKKEKF FEENACFLSA TAVIFSFVIQ RKKVEAALQD KVYFLETLLD TIPALVFYKD RKGIYQGCNE LFAKMILGSS KERIAGHSIY DLFKASSPEL EDIPELEDAY ERMDKQLFQK GGSHAYEAKV VCSDGLRRDF IFNKAIYKSF CGTVEGLIGV MLDITGRKKT EEKLQKSEER YRIIAEQTGQ LIYDIDLKNG LVEWAGAVNE LTGYSNKEIE NLDFYDWLEH IHSEDYRRVQ QTLKNCWNTG EKFNEEFRFK RKDGSYIFVK NKGVYLRDDE DFICRALGVM EDVTEIKQSS EKLRESEELY RSFLQNFKGI SFKLGPDFTP LLMQGAVEEI TGYIEDDLTS GRIKLIGLIN PEDMKMLEKS MEKMNSSPNS IREYDYRLKR KDGSVRWIHE LIHNVCNASG ETMFIQGYAY DITQRKKAEE TLEKAEKIGM RETHHRIKNN LQIVSSMLSL QADKFKDKEV IEAFRESENR VISMSIIHEE LYKSEDVASI DFAAYLRKLT ADILHSYRIG NEKVKLILEV DSTLFGVDTA IPLGIIINEL FSNSLKYAFP KDVEGKIRIS LSRNDVECQK TGEATETNFP ELPSSFTLVY SDNGGYFPEK VDFKNSKTLG LQLVNALVEQ INGTIELERG NETKYTIRFE DK
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