Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2923 |
Symbol | |
ID | 3626508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3744249 |
End bp | 3744647 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637701768 |
Product | formylmethanofuran dehydrogenase, subunit D |
Protein accession | YP_306398 |
Protein GI | 73670383 |
COG category | [C] Energy production and conversion |
COG ID | [COG1153] Formylmethanofuran dehydrogenase subunit D |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0830145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000724487 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATTTCG GATCTTTTCT TGCAGCTCCA GAAATAAAAG TCAAAGTCAT AACTTACAGG GACATCTTTC AGGATAAGGC TATGCTCGAA AACCGCTTTG GGGAAGAATA CAAAGACCTA TCTGCGATAA TAAAGCTGGA CCATGCAGAT CTCAAGCAGT TGGACCTGAA AAAAGGCGAT ACAGTAATTT TAAAAAATTC CTTTGGAAGA GTTGTGGTAA AAGCTGAGGA ATCCGGATAC GAAACTCCTC ACAAAGGCAT CGCATATATG CCCAAAAGCC CCTGGTCAAA TACGCTGGTT TCGGATGAAA CCGGAGGTAC AGGGGTACCT AAATTCAAGG ATATATCCGC AACCGTTACC AGCGCAAAAG GGGAAAAAGT GACTGAACTC ATGCTTTAA
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Protein sequence | MDFGSFLAAP EIKVKVITYR DIFQDKAMLE NRFGEEYKDL SAIIKLDHAD LKQLDLKKGD TVILKNSFGR VVVKAEESGY ETPHKGIAYM PKSPWSNTLV SDETGGTGVP KFKDISATVT SAKGEKVTEL ML
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