Gene Mbar_A2923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2923 
Symbol 
ID3626508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3744249 
End bp3744647 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content43% 
IMG OID637701768 
Productformylmethanofuran dehydrogenase, subunit D 
Protein accessionYP_306398 
Protein GI73670383 
COG category[C] Energy production and conversion 
COG ID[COG1153] Formylmethanofuran dehydrogenase subunit D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0830145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000724487 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATTTCG GATCTTTTCT TGCAGCTCCA GAAATAAAAG TCAAAGTCAT AACTTACAGG 
GACATCTTTC AGGATAAGGC TATGCTCGAA AACCGCTTTG GGGAAGAATA CAAAGACCTA
TCTGCGATAA TAAAGCTGGA CCATGCAGAT CTCAAGCAGT TGGACCTGAA AAAAGGCGAT
ACAGTAATTT TAAAAAATTC CTTTGGAAGA GTTGTGGTAA AAGCTGAGGA ATCCGGATAC
GAAACTCCTC ACAAAGGCAT CGCATATATG CCCAAAAGCC CCTGGTCAAA TACGCTGGTT
TCGGATGAAA CCGGAGGTAC AGGGGTACCT AAATTCAAGG ATATATCCGC AACCGTTACC
AGCGCAAAAG GGGAAAAAGT GACTGAACTC ATGCTTTAA
 
Protein sequence
MDFGSFLAAP EIKVKVITYR DIFQDKAMLE NRFGEEYKDL SAIIKLDHAD LKQLDLKKGD 
TVILKNSFGR VVVKAEESGY ETPHKGIAYM PKSPWSNTLV SDETGGTGVP KFKDISATVT
SAKGEKVTEL ML