Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2904 |
Symbol | |
ID | 3627226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3718337 |
End bp | 3719008 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637701752 |
Product | hypothetical protein |
Protein accession | YP_306382 |
Protein GI | 73670367 |
COG category | [R] General function prediction only |
COG ID | [COG2102] Predicted ATPases of PP-loop superfamily |
TIGRFAM ID | [TIGR00289] conserved hypothetical protein TIGR00289 [TIGR00290] MJ0570-related uncharacterized domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.449464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000871155 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACTCG CAGCACTGAT TTCCGGTGGC AAGGACTCGA TTTTTGCCAT ATATAAAGCC CTCCAGGAAG GGCATGAAGT CACCCACCTG ATTAATATTG TCCCTGCAAG GGACGATTCT TATATGTACC ATTCCGTCAA CCTCCACATG GTAGAATTAA TCTCTGCCGC CTGTGAAATC CCCCTGGTCC AGCAAGAGTC CAGCGGAATA AAGGAACTCG AACTGGATGA CCTGACCCTT GCCCTCAAGA AAGTAGATGT AGACGGCGTA TCCGTAGGTG CAATTGAGTC ACAGTACCAG GCAGGTAGGG TGAAGAAGAT CTGCGATGCC CTGGGGCTTA AGGTCTATAC TCCTCTCTGG CACAGGGACC CTGAAGAATT GCTCAATGAA ATGTCAAAAG TACTCGATAT CCGGATTGTC AGAGTCGCAG CTGACGGCCT CGACGAGTCC TGGCTTGGTC GCCCTATTAA TGTAAACTCG ATTGAACATC TCAAAGCGCT GAACAAGCGA TACATGGTTC ATATGGCCGG AGAAGGCGGA GAATATGAGA CTGTTGTGCT TGATGCTCCC TTTTTTAAGA AACGGATTGA GATTGTAAAA AGTGAAGTTG AATGGCAGGG TGACACTGGC TCCTTAAAGA TTCTGGAAGC AAAACTTGTC GATAAAAATT GA
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Protein sequence | MKLAALISGG KDSIFAIYKA LQEGHEVTHL INIVPARDDS YMYHSVNLHM VELISAACEI PLVQQESSGI KELELDDLTL ALKKVDVDGV SVGAIESQYQ AGRVKKICDA LGLKVYTPLW HRDPEELLNE MSKVLDIRIV RVAADGLDES WLGRPINVNS IEHLKALNKR YMVHMAGEGG EYETVVLDAP FFKKRIEIVK SEVEWQGDTG SLKILEAKLV DKN
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