Gene Mbar_A2857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2857 
Symbol 
ID3627025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3658526 
End bp3659269 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content42% 
IMG OID637701707 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_306337 
Protein GI73670322 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00741343 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00816683 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTGAAG TAAGAAATCT TTCTAAATCC TACGGAAGTA GAAAGGCAGT AAATGACATT 
TCCTTTTCGA TTGGAAAAAG TGAGCTTTTT GGGCTTCTGG GCCCTAACGG GTCAGGAAAA
ACAACCATGA TCAAAATGCT TACCGGTCAA ATAAAGCCAA CCTTCGGCTC AGTCAGGGTA
CTGGGAGTAG ATGTGCTCGA AGACCCTATT CGAGCTCGCG AACTTGCAGG TATTGTTCCT
GAACAGGAAA CTCCACCGAG TTTTTTGACG GCAGAGGAAT ACCTCTATTT TGTTGCAAAG
ATCCGGAAAA TGGAAAACTA CGAGAAAGCC TGTGAAAAAT GGTTTGAATT CCTGGATTTT
GGGGACCAGA ATAATTCACT GTGCAAGGAC CTCTCAAGAG GCACAAGACA AAAACTGATG
TTTGCCCAGG CTTTCCTGCA TGAGCCTGAA CTCGCAATTA TTGATGAGCC TCTAATCAAC
TTAGACCCTG TAATGCAGAA AAAAGTAAAG GATTTTCTCA CAATCTGTGT GAAAAACGGG
GGAACAGTTT TTATTTCAAC ACATATCCTT GAAATTGCAA AACAGATCTG TACCAGCATT
GGGATCATTT ACAAAGGAAA AATGGTTTAT ACAGGCCGCG TGGACGATCC TGTTCTTCAG
GAAAGGAGCT TTGAAGAATT CTTTCTGGAA CTGGTAAGCC AATCAGGGAA TTCCGGCATC
GGTTTGATTA TACCTGCACA TTAA
 
Protein sequence
MIEVRNLSKS YGSRKAVNDI SFSIGKSELF GLLGPNGSGK TTMIKMLTGQ IKPTFGSVRV 
LGVDVLEDPI RARELAGIVP EQETPPSFLT AEEYLYFVAK IRKMENYEKA CEKWFEFLDF
GDQNNSLCKD LSRGTRQKLM FAQAFLHEPE LAIIDEPLIN LDPVMQKKVK DFLTICVKNG
GTVFISTHIL EIAKQICTSI GIIYKGKMVY TGRVDDPVLQ ERSFEEFFLE LVSQSGNSGI
GLIIPAH