Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2857 |
Symbol | |
ID | 3627025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3658526 |
End bp | 3659269 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637701707 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_306337 |
Protein GI | 73670322 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00741343 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00816683 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTGAAG TAAGAAATCT TTCTAAATCC TACGGAAGTA GAAAGGCAGT AAATGACATT TCCTTTTCGA TTGGAAAAAG TGAGCTTTTT GGGCTTCTGG GCCCTAACGG GTCAGGAAAA ACAACCATGA TCAAAATGCT TACCGGTCAA ATAAAGCCAA CCTTCGGCTC AGTCAGGGTA CTGGGAGTAG ATGTGCTCGA AGACCCTATT CGAGCTCGCG AACTTGCAGG TATTGTTCCT GAACAGGAAA CTCCACCGAG TTTTTTGACG GCAGAGGAAT ACCTCTATTT TGTTGCAAAG ATCCGGAAAA TGGAAAACTA CGAGAAAGCC TGTGAAAAAT GGTTTGAATT CCTGGATTTT GGGGACCAGA ATAATTCACT GTGCAAGGAC CTCTCAAGAG GCACAAGACA AAAACTGATG TTTGCCCAGG CTTTCCTGCA TGAGCCTGAA CTCGCAATTA TTGATGAGCC TCTAATCAAC TTAGACCCTG TAATGCAGAA AAAAGTAAAG GATTTTCTCA CAATCTGTGT GAAAAACGGG GGAACAGTTT TTATTTCAAC ACATATCCTT GAAATTGCAA AACAGATCTG TACCAGCATT GGGATCATTT ACAAAGGAAA AATGGTTTAT ACAGGCCGCG TGGACGATCC TGTTCTTCAG GAAAGGAGCT TTGAAGAATT CTTTCTGGAA CTGGTAAGCC AATCAGGGAA TTCCGGCATC GGTTTGATTA TACCTGCACA TTAA
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Protein sequence | MIEVRNLSKS YGSRKAVNDI SFSIGKSELF GLLGPNGSGK TTMIKMLTGQ IKPTFGSVRV LGVDVLEDPI RARELAGIVP EQETPPSFLT AEEYLYFVAK IRKMENYEKA CEKWFEFLDF GDQNNSLCKD LSRGTRQKLM FAQAFLHEPE LAIIDEPLIN LDPVMQKKVK DFLTICVKNG GTVFISTHIL EIAKQICTSI GIIYKGKMVY TGRVDDPVLQ ERSFEEFFLE LVSQSGNSGI GLIIPAH
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