Gene Mbar_A2827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2827 
Symbol 
ID3627070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3611982 
End bp3613106 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content37% 
IMG OID637701677 
Producthypothetical protein 
Protein accessionYP_306307 
Protein GI73670292 
COG category[L] Replication, recombination and repair 
COG ID[COG5421] Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.46901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.235297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTGACA CTCTTCTTCC TCAGAAAAGT GGCCATAACC TTTCTCATTC TACTGTTCTT 
AAGGCAATGT GCATTAACGG TTTAGGATTT ACTGAACGTC GTCTTTACCT ATTTCCTGCT
TTCTTTGAAA ACTTGCCCAC TGAAAAGTTA CTGGGAGAAG GTGTTCTCCC AGAACATCTT
AATGATGACG TTTTTGGCAG AACTATGGAC AAAATCCAGG AATATGGAGC AACCGAAATC
TTCAACCATA TCATTCTGCA AGCTTTGAAA CACGTTCCTA TTAATCCTCG TCTTTGTCAT
TCAGATACTA CAAATTTCAG TGTTTATGGT GACTATGAAA ACGATGATAA CGGCAAAAAT
ATCAACATTA CTTATGGTCA TCCTAAAGAC AAGAGAGTAG ACTTACTTCG TTTTTCTATT
TATATGGTTA CTGACCAGAA AGGAATTCCT CTGTTCGTGA GAGCATTGGA TGGTAACAGT
TCCGATAAGA AAGTTCTCAT CAAAACCATA AAGGAAGTAA CGCAGAACCT GAATCTTGAT
CAGAGAGTTT ATCATGTTGC AGACAGCGCA TTTTATACTG AAAGTAATGT CGAGGAAATA
GGAACTAACG CTTTTTTCAT CTCGAGAGTA CCTGCAACCA TCAATGAATC AAAGGAATTA
TTGATGACAG ATTTAGTTCT GGAAACATGC TCTGATGAAC GTTATTCTTG TTATGCTGTA
AAATCCTGTT ATGGTGGAGT AGAACAGTTA TGGGTTGTAT TTTGTTCAGA GGAAATGAAA
AAGAAGGAAG AGAAGAAATT TGATGAAAAG ATTCTTAAAG AGCTTGACGC AGCAGAAAAG
TCCCTTAAAA AGCTTTCTAA TCATGAATTT GCTTGTGAAG CAGACGCAAG AATAGCTGCT
GAACAATGGT TGAAAGAGAA TGAACTGTAT GAATTCCAGA AACTTGAGAT AAAAACTAAG
TCACACAGAC TTGAAAACAA GAAAGGAAGA CCAGGGAAAG GTGAAGATGT ACAGACTTTT
TACCTGATAG AAGCAGAGAT AAAACACGAT CAGGAGAATA AAGAACAGGG AACAGTTGAA
AGAGAGTTCA GGTTCCTTAA AGATAAGAGT TTCAGAGTGT CTTAA
 
Protein sequence
MIDTLLPQKS GHNLSHSTVL KAMCINGLGF TERRLYLFPA FFENLPTEKL LGEGVLPEHL 
NDDVFGRTMD KIQEYGATEI FNHIILQALK HVPINPRLCH SDTTNFSVYG DYENDDNGKN
INITYGHPKD KRVDLLRFSI YMVTDQKGIP LFVRALDGNS SDKKVLIKTI KEVTQNLNLD
QRVYHVADSA FYTESNVEEI GTNAFFISRV PATINESKEL LMTDLVLETC SDERYSCYAV
KSCYGGVEQL WVVFCSEEMK KKEEKKFDEK ILKELDAAEK SLKKLSNHEF ACEADARIAA
EQWLKENELY EFQKLEIKTK SHRLENKKGR PGKGEDVQTF YLIEAEIKHD QENKEQGTVE
REFRFLKDKS FRVS