Gene Mbar_A2782 details

Gene Information

• Locus tag: Mbar_A2782
• ID: 3625110
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosarcina barkeri str. Fusaro
• Kingdom: Archaea
• Replicon accession: NC_007355
• Strand: -
• Start bp: 3538015
• End bp: 3544383
• Gene Length: 6369 bp
• Protein Length: 2122 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637701633
• Product: cell surface protein
• Protein accession: YP_306263
• Protein GI: 73670248
• COG category: [R] General function prediction only
• COG ID: [COG3291] FOG: PKD repeat

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.759691
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 7
• Fosmid unclonability p-value: 0.00484383
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAAAAAAA TATTTCTGAT TCTCTGTATC GTTGCACTGA TGTGCATGAC TGGATTAGTG 
TCCGCAGCAG TTGTGACAGA TGCTCCTGTC GCAAACTTCA CTGCTAATCC CACCAGCGGC 
ACTGCCCCCC TAACTGTACA GTTCACTGAC ATATCCACCA ACGCAACCAG CTGGGCGTGG 
GACTTTAATA ACGATGGAAC TGTAGACAGC ACTGAGCAGA ACCCGGTTTA CACTTACACC 
GCAGCTGATA ACTATACCGT CAACCTCACG GTTGCCAATG CAGGTGAGAA GAGTGATTCT 
GAAGTAAAGA CCGATTACAT TGTCGTAAAT GAATCGCTTC CGAAGTCACT GGTTGCAAAC 
TTTACTGCAA ATGTGACAAC CGGTACATCA CCACTGACCG TCGAATTCAT AGATATCTCT 
ACTGGCTCAC CGACGAGCTG GCAATGGGAT TTCAACGATG ATGGGATAAT TGACAGTACT 
AAGCAGAATC AAATCTACAC GTATTCAAAA GCAGGTAACT ATACCGTCAA CCTTACGGTT 
TCCAACGCCG ACGGTAACGA TTCTGAAGTA AAAATCGAGT ACATTATTGT GAGTGAATCA 
CTTTCTGGAG CTCCGGTTGC AGATTTTGCA GCAACACCTA CTTCTGGAGA TGCACCACTT 
ACTGTTAACT TCACTGATGC TTCAAATGGT ACGGTTTCTT CCTATTCATG GGACTTTGAT 
AATGATGGAA CTGTGGACAG CACTGAGCAG AACCCCTCGT ATACCTACAC CTCAGCTGGC 
AAATACACCG TCAACCTCAC TATCACGAAC GCCACTGGTA GTGACTCCAA AGTGAAAACG 
AATTATGTAA CTGTAGAAGG AACAGGAACT GGTGGACTTG CAGACACAGC ATGGCCCAAA 
TTCCACAGAG ATCTCAACAA CACCGGGCAA TCACCATATA ACGGGCCGCA GACTAACACT 
ACCATATGGA ACTACACCAC TGGGTCCATC AATTACGCAT CTCCTGTTAT TGGATCAGAT 
GGAACCATCT ATATCGGGAG TTACGGAAAC AGTAAATTAT ATGCAATAAA CCCTGATGGA 
ACCCTAAAAT GGACATACAA CACAGGAGGC AAAATCTCAG GTTCAGCGGC TATCGGGACA 
GATGGAACAA TTTACATTGG AAGCTACGAC AAAAATATTT ATGCAATAAA CCCTGATGGA 
ACCCTAAAAT GGGCATACAA CACAGGAGGC TCAATCTCAG GTTCAGCGGT GATTGGATCA 
GACGGAACCA TATACATAGG AAGCAGTGAC GATAAAGTCT ATGCTATAAA TCCCGACGGA 
ACCCTAAAAT GGACATACAC TACAGGAAAA ACGATTTCCG GTTCATTGGC GATTGGAAAA 
GATGGAACTA TATACATAGG AAGCTATGAC AAATATCTAC ACGCACTAAA TCCCAATGGC 
ACACTTAAAT GGAAATATAA AACATGGCAA TTCTACCATG GATCCCCATC AATTGGAACA 
GATGGAACTA TATATACAGG AAGCTCTGGA AGCAGTAACT TATACGCATT AAATCCCGAT 
GGAACACTAA AATGGAGATA TTCCACAGGG GATATATATG GAGGCACACC CGCAATTGCA 
ACTGATGGAA CTATATATAT AGGAAGCTAC AGTCGTAGCC AAATCTATGC CTTGAATCCT 
GACGGAACAC TGAAATGGAC GTACAACGCA GGAGCTATTT TTGGTTCAAT GGCTCTTGGA 
GCAGACGGAA CCATATACAT AGGAAGCAGT GACAAGAAAG TCTATGCAAT AAATCCTGAT 
GGAACCCTAA AATGGAGCTA TACCACCGGA GGCACAATAT ACGGTTCGCC AGTTATTTCA 
GCAGACGGAA CTCTTTACAT TGGAAGCTAC GACGGTAAAT TATATGCTTT CAAAGATGTT 
GGTCCTGTTG CCAATTTCAC CGCCACCTAT GTTCCCGGTG CCCCGCTAAC AATTCAGTTT 
AATGACACTT CCAGCTATAA CCCGACTTCT TGGGCATGGG ACTTTGGAGA CAACGAGACC 
TCCACTGAGC AGAACCCGGT ACATACCTAT GCAAAAGCTG GGAACTACAC TGTCACTCTC 
ACTGCAGCTA ATGATTACGG CAGCGACGCT GAGACTAAAA CTGAAAGATT CGAAACTTTA 
GTCGCCACAT CGATCACGGT TTCTCCTGTT TCTGCTCAAC TCTATCTGAA CAAGACCCAG 
CAGTTCTCTG CAACTGCTAT CGATCAGTTT GGGAAAAACA TGTCTGACGT TTCCTTCACC 
TGGTTGAGCA GTAACGAAAG CGTTGGTACT ATCAATACCT CAGGGCTATT AACATCTCTT 
GCCCCAGGCA CGACAAATGT CACCGCTTCA TCCGGGAATG TCAGCGCATT CGCACAGGTA 
ACAGTCATAG GGCCATCTCC AGACCTTAAC ATATCTTCCG TCACCTCCAC TACATATCCA 
ATTTCTTACA ATAAAATCAC TGCAACTATC AGGAATGAGG GAACCGAGGA TGCAGGTGCA 
TTCAAAACCA ATTTCACAGT GGACGGCAAC ACCACGAGTA TTGAAATTCC TGGACTCGAT 
GTGGGAAATA CAACTACTAT TAGCATCACT GACATGGTAA GACGGAAATC TGGAGATTCC 
ATCCCTATCA TGGTCATGGT CGACCCTGAA AACTCTGTTG CCGAAGCAAA TGAGACCAAT 
AATTTGTACA CAACAAATGC GACCATAACT GCAAGTGGTG ATCTCTGGCA GGGTGGCCGG 
TTCTCTGTGG GCCACGACCT AGTAAATAAT GCTGTTTACG AGGAAGGAAA TAGCGGAGTG 
GCAATTGCAC TGTCTGGTGC CTATACTTCA AGTTCCAGCG CGACAGGTAT TACTTTTACT 
AGGACTTTTA GTGCTGAGGA CATGAAAATC CCAGCAGGGG CAACCATTAA ATCAGCCAGA 
ATCTATCAAG GCTGGACCTG GTACGGCGAT CCCGGATTCA ACATGCAGTT CAACGGCCGT 
GAGAGCCAGA AACCTGATGT CAAATATATT GATTCCATTA ATGGTCAGGC TGTCTTTGAT 
GTGACTCCTT ATTTCAATGC AACAGGCAAC AACACCGCAG TTATAGCCTC AACAACTACT 
TCCCAAGTTG ATTTTGCCTA CTACGGCACA TTGCTTGTTG TGGTTTACGA GGCTCCCAGT 
GAACCCTACA GGCAGATCTG GGTTAATGAA GGCAGCGATT GCCTGCTCTA CAGCATGGGT 
ACCGGCTATA CCATGTTCGA AAATGTGACT ACTGACGGTC TTTTCTCCGC TAAAATCACC 
ACAGTCCTGG AATCAGGTGA TGGTACGGAT GGTAGCAGTA TCACCTTTAA TGATAGATCC 
CTTTCTAACA CTGGAAGCGG CGGAGCAGAT CCACTTCTCA GGTATTTTAA TGTATCCGAT 
GCCCTTCGGG ATGGAGAGAA CGAACTGGGA GTCGCTGGTA ATAGCTACTT TAATCTTGCC 
AATGCTATCC TCGAAGTCAC CAAAGTAACC GCCTCTGAAG CAAATTTCAC AGCAAACACT 
ACGAATGGAA ACGCTCCACT AAACGTGAAA TTCACCGACA CCTCTACAGG TACCCCAACC 
AACTGGACCT GGGACTTCGG AGACGGCAAA ACATCAACCG AGCAAAACCC GACTCACATT 
TACAAGTCAG AAGGAAATTA TACCGTAAAA CTCACGGTAT CAAATTCCCT TGGAAGCGAT 
TCAGAGGAGA AAAACGGGTA CATAACCGTT GGTTCTGTAG TCCTTGCTCC TGAAGCCAAT 
TTCAGTGCAG ATCAAACAAG TGGTAATGCG CCTCTCACTG TTCAGTTCAA GGACAAATCT 
ACAAACACTC CAACTTTGTG GGAATGGGAC TTCGGAGACG GCAAAACCTC TATCGAACAG 
AATCCATCTC ATACTTATGA AACCGTGGGC ACATACACCG TAAATCTGAC TGCCATGAAC 
TATGGCGGGA GCAACACCAC AACAAAAACC GACTACATAA CTGTAACTTC TGATACTTCA 
GCACCGGTTG CGAGTTTTAC TACCGATTCA AATTCAGGCC AGGTGCCTTT TACAGTCAAG 
TTCACAGACA CCTCCACAGG TAAAGTAAGC AGCTGGAATT GGGACTTTGG TGACGGCAGC 
ACTTCCATAA AACAGAATCC CACCCACACT TACGTGACAG AAGGAAGTTA CAATGTCACT 
CTCACTGCCA CTGGTCCTGG AGGAAGTAAC ACAGCAACTT CTGCCAAGCC TATTATTGTC 
AGTACCCCGC TTACCTCACC AAGTTACAAC GGAGGGATTC CACTGACTAC CGCTCAGAAC 
GGAACTGTTT CAGGCGGGTT ATGGTATGAT TCGTATCCCG GATTTTCAAC ATCTGCTCAA 
AAAACATTTA CTTTGCCTGA TTACACTAAG GTTAAATGGG CCAGGCTCTA CGTCGATGTC 
TACGACGGAC ATATGGAAAA TAATTACCGT GGCAATGTGA ATATCGACAT AGATGCAAAC 
GGAGACAGCA AATACGAGAT ACAGAAGAAT GAGACTTTCG ACACAACTTA TTCGTTCCCA 
GGCGAAGGCG GAATCGGTCC TGTCTGGTTA AGTGACCACA TGAACCGTGT AACAAGCGAC 
TACCTTATGT GGTACGACCT TACCGATGTG ATTACAGGTC AGCAGGTTAA TGTTCAAGCC 
ACAACCACAA AAATTGATTC GTCATTTGAC GGTCGTGTCA AAGCTATGAT GCTGGTTGTT 
GCATATGACG ATGGCGATTC TGACCAGGTT TATTACTGGG TCAACCAGGG CCATGATACA 
GTTAATCCGC TGGATGAAAC ATATACGGGT TCGACCTCAT TTGGTACCTC CTCACTTGCA 
AGCGGTTGGA GTTCAGCAAA TCTGACTGCG ATCTATCTTG CCAGCAAAGA TGGGGGCTAC 
ACTTTCAATG GAACAACACT GGATTCTGGT GTGGCATCAG GGTCTTATTA TGGAGCTAAT 
ACCTGGGATA TAAGCAGCCT TCTTGGTGCT GGACAGGACA GTGCACTTAC TTACAACAAG 
CAGGACAGCA GCTACTATAA GATTCCACTT GCCCTTATGA GTGTCAAGTA TACGTCAGCT 
TCACCTGAAT TACTCACTGC AGATTTCAAA GCGGACGTAA CAAGCGGTAA TGCACCTCTA 
ACGGTTAACT TTACGGATCA GTCAACTGGA TCACCGACGT CCTGGTTCTG GGACTTCGGG 
GACGGTACAA ATGCTACCGA GCAGAATCCG ATCCACACGT ACATATCAGC CGGTAACTAT 
ACTGTCAATC TTACGGTTGC AAATGCTGAC GGCAATGATT CTGAAGTAAA AACTGAGTAC 
ATTATCGTAA GTGAACTACT TCCTGGCGCT CCGGTTGCAA ACTTTACAGC CAATAAGACC 
AGTGGAAAGG CTCCACTTGA CGTTCAGTTT ACAGACGCTT CAACTGGTAA TATCTCATCC 
TATGCATGGG ACTTTGATAA TGATGGAACT ATAGACAGTA ACGAACAGAG TCCTTTGTAT 
ACCTACGCTT CAGCCGGCAC CTATACTGTC AACCTTACGG TTGCAAATGC TAACGGTAAC 
GATTCGGAGG TAAAAACCGG GTACATTAAG GTCTCCAGTC AATCTTCATC AAAGCCAGTA 
GCTGAATTTT CTGCGTCGCC TACTTCAGGA AAAACACCAT TAAAGGTTAA ATTTACTGAT 
ACAAGCACTG GTTCTCCAAC TTTCTGGTTC TGGAAATTTG GAGATGGATC AAAATCATTC 
CACCAGAATC CTGTTCACAA GTATTCAAAG GCAGGAACAT ATACTGTTAA CTTGACAGTA 
AAGAATGCTA AAGGCAAGAA CACGGTAACA AAAACACAAT ATATAAAAGT GATTACAAAG 
CCAGCTGCAA ACTTCAACAG CAGTGTTACA TCAGGAAAAA CACCATTAAA GGTTAAATTT 
ACTGACACAA GCACAGGAAT ACCTGCTAAA TGGAGATGGG ACTTTGGAGA TGGATCAAAG 
TCATTCCTTC AGAATCCGGT TCACAAGTAT TCTAAGGCAG GAACATATAC TGTTAACTTG 
ACAGTAAAGA ATGCTAAAGG CAAGAACACG GTAACAAAAA CAGAATATAT AAAAGTGATT 
ACAAAACCGG TTGCAAACTT CACCAGCAGC GTTACATCAG GAAAAACGCC ATTAAAGGTT 
AAATTTACCG ACACAAGCAC AGGAATACCT GCTAAATGGA GATGGGACTT TGGAGACGGA 
GCAAAGTCAT TCCATCAGAA TCCAGTTCAC AAGTATTCTA AGGCAGGAAC ATATACTGTT 
AACTTGACAG TAAAGAATGC TAAAGGCAAG AACACGGTAA CAAAAACACA ATATATAAAA 
GTTATATAA 

 

Protein sequence

MKKIFLILCI VALMCMTGLV SAAVVTDAPV ANFTANPTSG TAPLTVQFTD ISTNATSWAW 
DFNNDGTVDS TEQNPVYTYT AADNYTVNLT VANAGEKSDS EVKTDYIVVN ESLPKSLVAN 
FTANVTTGTS PLTVEFIDIS TGSPTSWQWD FNDDGIIDST KQNQIYTYSK AGNYTVNLTV 
SNADGNDSEV KIEYIIVSES LSGAPVADFA ATPTSGDAPL TVNFTDASNG TVSSYSWDFD 
NDGTVDSTEQ NPSYTYTSAG KYTVNLTITN ATGSDSKVKT NYVTVEGTGT GGLADTAWPK 
FHRDLNNTGQ SPYNGPQTNT TIWNYTTGSI NYASPVIGSD GTIYIGSYGN SKLYAINPDG 
TLKWTYNTGG KISGSAAIGT DGTIYIGSYD KNIYAINPDG TLKWAYNTGG SISGSAVIGS 
DGTIYIGSSD DKVYAINPDG TLKWTYTTGK TISGSLAIGK DGTIYIGSYD KYLHALNPNG 
TLKWKYKTWQ FYHGSPSIGT DGTIYTGSSG SSNLYALNPD GTLKWRYSTG DIYGGTPAIA 
TDGTIYIGSY SRSQIYALNP DGTLKWTYNA GAIFGSMALG ADGTIYIGSS DKKVYAINPD 
GTLKWSYTTG GTIYGSPVIS ADGTLYIGSY DGKLYAFKDV GPVANFTATY VPGAPLTIQF 
NDTSSYNPTS WAWDFGDNET STEQNPVHTY AKAGNYTVTL TAANDYGSDA ETKTERFETL 
VATSITVSPV SAQLYLNKTQ QFSATAIDQF GKNMSDVSFT WLSSNESVGT INTSGLLTSL 
APGTTNVTAS SGNVSAFAQV TVIGPSPDLN ISSVTSTTYP ISYNKITATI RNEGTEDAGA 
FKTNFTVDGN TTSIEIPGLD VGNTTTISIT DMVRRKSGDS IPIMVMVDPE NSVAEANETN 
NLYTTNATIT ASGDLWQGGR FSVGHDLVNN AVYEEGNSGV AIALSGAYTS SSSATGITFT 
RTFSAEDMKI PAGATIKSAR IYQGWTWYGD PGFNMQFNGR ESQKPDVKYI DSINGQAVFD 
VTPYFNATGN NTAVIASTTT SQVDFAYYGT LLVVVYEAPS EPYRQIWVNE GSDCLLYSMG 
TGYTMFENVT TDGLFSAKIT TVLESGDGTD GSSITFNDRS LSNTGSGGAD PLLRYFNVSD 
ALRDGENELG VAGNSYFNLA NAILEVTKVT ASEANFTANT TNGNAPLNVK FTDTSTGTPT 
NWTWDFGDGK TSTEQNPTHI YKSEGNYTVK LTVSNSLGSD SEEKNGYITV GSVVLAPEAN 
FSADQTSGNA PLTVQFKDKS TNTPTLWEWD FGDGKTSIEQ NPSHTYETVG TYTVNLTAMN 
YGGSNTTTKT DYITVTSDTS APVASFTTDS NSGQVPFTVK FTDTSTGKVS SWNWDFGDGS 
TSIKQNPTHT YVTEGSYNVT LTATGPGGSN TATSAKPIIV STPLTSPSYN GGIPLTTAQN 
GTVSGGLWYD SYPGFSTSAQ KTFTLPDYTK VKWARLYVDV YDGHMENNYR GNVNIDIDAN 
GDSKYEIQKN ETFDTTYSFP GEGGIGPVWL SDHMNRVTSD YLMWYDLTDV ITGQQVNVQA 
TTTKIDSSFD GRVKAMMLVV AYDDGDSDQV YYWVNQGHDT VNPLDETYTG STSFGTSSLA 
SGWSSANLTA IYLASKDGGY TFNGTTLDSG VASGSYYGAN TWDISSLLGA GQDSALTYNK 
QDSSYYKIPL ALMSVKYTSA SPELLTADFK ADVTSGNAPL TVNFTDQSTG SPTSWFWDFG 
DGTNATEQNP IHTYISAGNY TVNLTVANAD GNDSEVKTEY IIVSELLPGA PVANFTANKT 
SGKAPLDVQF TDASTGNISS YAWDFDNDGT IDSNEQSPLY TYASAGTYTV NLTVANANGN 
DSEVKTGYIK VSSQSSSKPV AEFSASPTSG KTPLKVKFTD TSTGSPTFWF WKFGDGSKSF 
HQNPVHKYSK AGTYTVNLTV KNAKGKNTVT KTQYIKVITK PAANFNSSVT SGKTPLKVKF 
TDTSTGIPAK WRWDFGDGSK SFLQNPVHKY SKAGTYTVNL TVKNAKGKNT VTKTEYIKVI 
TKPVANFTSS VTSGKTPLKV KFTDTSTGIP AKWRWDFGDG AKSFHQNPVH KYSKAGTYTV 
NLTVKNAKGK NTVTKTQYIK VI