Gene Mbar_A2730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2730 
Symbol 
ID3624494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3468041 
End bp3469225 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content40% 
IMG OID637701583 
Producthypothetical protein 
Protein accessionYP_306213 
Protein GI73670198 
COG category[S] Function unknown 
COG ID[COG4198] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00608426 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000203528 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTTTAC ATGTTCCACG CATTCTTCTT CCAAAAGATA ATTGGGAAAA GTGGGCAGTG 
ATTGCCTGTG ATCAGCACAC TCAGGACCCG GAGTACTGGA AAAGAGTTGA AGAATTTATT
GGAGATGCCC CCTCTACTTT TAACTTAATT TATCCGGAAA TATATCTTCC GCTAGATGAA
AATAGAGTAA ATAAGATTCA TAAAACCCTA AGTGACTACA AAAAACTTCT CGTTGACCAC
GGCCCCTGTT TTATTCTCGT AAGGCGTTTG GTCTCAGGTA AGGAAAGAAC CGGACTTGTT
GTTGCAATAG ACCTGGAAGA ATACCAGTTC AACGGGTCCG ACTCGTTTAT CAAACCAACG
GAAGGCACTA TTAAAGAAAG GCTTCCTGCA AGAGTCAGGA TAAGGGAAAA TGCAGAACTG
GAACTCTCGC ACATCTTAGT GTTATATGAT GATCCTTATT TCTCGGTTAT TCCCAGAAAC
CCTGATGATT TTGTTTGTGA AGAGAACAAA GTTTATGATT TTAACCTGAT GGAAAACGGC
GGTCACATCG CGGGTTACAG GATCAGTGAT GAAAAGATAA TTACAGAAAT TTCGGATAAA
ATCCTGAACC TGGAAACACT TCTTGTTGGT GATGGAAACC ACAGCCTTGC TGCTGCAAAG
AGCTTCTGGG AACAAATTAA AGGGACTGTA CAGGCCGATC ATCCTGCAAG ATACGCAATG
GTTGAGCTTG TAAATGTTCA CGACCCCGGA CTTTCCTTTG AACCTATTCA CAGAGTTGTA
AGCGGAATTG AACCTGAAGA GCTGCTCAAA AAATTTGATG CAAGAATCGA AGAAACCAGA
CCTTCTATCT CAAATGCCGA TTTTCCGGTT GCAGGACATT CAATAGGGTT TATTACAAAA
GACAGGTCTG GCATGCTGAT TTTTGATAAT CCCGTATACG ATCTTGAGGT CGAAACCCTT
GACGAGATCA TTGATAATTA TTCAATCGAA TATGAACATG ATCCTGAAGT TGTGGAAAAA
CTTGGAAAAA AACAGGGTAA TATCGGTTTC TTCCTTCCCC CATTGAAAAA GAGCGATTTC
TTTTCTCTTA TTAAAAAGAA AGGGGTTCTT CCGAGAAAAT CGTTTTCTCT TGGAAAGGAA
AACGAGAAGA GGTATTATAT CGAAGCCAGA AAGATTGTTC CATAA
 
Protein sequence
MVLHVPRILL PKDNWEKWAV IACDQHTQDP EYWKRVEEFI GDAPSTFNLI YPEIYLPLDE 
NRVNKIHKTL SDYKKLLVDH GPCFILVRRL VSGKERTGLV VAIDLEEYQF NGSDSFIKPT
EGTIKERLPA RVRIRENAEL ELSHILVLYD DPYFSVIPRN PDDFVCEENK VYDFNLMENG
GHIAGYRISD EKIITEISDK ILNLETLLVG DGNHSLAAAK SFWEQIKGTV QADHPARYAM
VELVNVHDPG LSFEPIHRVV SGIEPEELLK KFDARIEETR PSISNADFPV AGHSIGFITK
DRSGMLIFDN PVYDLEVETL DEIIDNYSIE YEHDPEVVEK LGKKQGNIGF FLPPLKKSDF
FSLIKKKGVL PRKSFSLGKE NEKRYYIEAR KIVP