| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2716 |
|---|
| Symbol | |
|---|
| ID | 3624464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 3450022 |
|---|
| End bp | 3452739 |
|---|
| Gene Length | 2718 bp |
|---|
| Protein Length | 905 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637701570 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_306200 |
|---|
| Protein GI | 73670185 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0426299 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00105391 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAAG ACGATTCCAA TGATGGTAGT ATAATTGGAG GAAATGGAAT AACAGCTGGA
AAAGACGTTT TTCTTCATAA TATTAAAGCT CCTGTTAATA TAGGAAATAC GAATAATACA
AATCAGAATT ATACTACATA TATAATTTCT GAAAATATTG AAGAGCACAC TAAATCATTA
ATTGATTTTG CTCAGTTTTG TGAGAATAAA AGAGAATATG AGAAAGCCCT TGACTATTAT
GAACAGGCAA GAGTAAAATT AGAAAAGAGT GAATCAAAGA TTTTATTAGT AAAAGTAATG
ATGGGAGAAG CTGTTTGTCA TCATAAAAAA GGGAACTTAT CCAGAGCAAA AAACTTGATA
TTTGAGGCAG AAAGGTTAGA CCCTAAAAAT CCCACTGTTT TAGCTAATAT CGCATCACAG
TTAAAATCTG AAAATCCAGA TGAAGCTGAA ATTTATGCCA AAAAAGCTCT AGAGTTTGAT
AAAAATAATT TTTTGGCAAA GTGTGTTATA GGTTTGTTAG AATATGATAA AGGAAATATT
AAAGATTCTC TGAGAACACT TAAACAGGCA TCAACCATTA ATCCTAATGT TGGATATCCT
TTCAATTGCA TGGCTCGAAT ATATTCCAGT GAAAAAGATT ACGGAAATGC TATAAAATAT
GGAAAAAAAG CTGTAAAAAT TGAATCTGAC AATGCCATTT TTCTTATGGA ATTAGCCATA
GATTACATGA ATATAGCTTT TCCTGAGAAT GAAGTTTGTA TTTCTTCTGA TTTTTCAAAG
ATGCTCAAGA TGGAATATTT AGAAAAAGCA CTAAAATGCC TAGAAAAAGC AAAAGAAATG
AGTGAGTCAC AAGGTAACAA TTACTTAAAT TGTGAAATAT ACACATATTT AAGCAGAGTA
CATCTTGCTA AAGGAGAATT TAATAAATCA ATAGAGTACT GTGAAATGAT TATTAATAGT
GGTTTAGACA CTATCGATAT CTACATAATT CTAGGGGAAG CATATGGTGA ATGCCAGAAT
TATGACAAGG TAATCGAATA TTATGAGCTC CTTCTTAAAA GAGAAAATCT AACAGAGAAC
CATCTCTTTA TCGTAAAAGC AAATCTTGCT ACTTCATACT TTTATAAAAA TCGGCTTAAC
GAAGCTGAGA AATTATTCAA AGAATTAATT GATGAAAATC CAGAAAATAT AAATTTATGT
ATACAAATGT CTAATGTCTT GGAGGAAAAT GGGAAAATAG AAAAAGCGTT TTCCCTTTTA
GAGAAAATTG ATAAATTTTC CCAAAAACCA TGGGATTTTT ACTATATGAT GGGAAGATTA
TATCACAAGA AAGATGATTA TGAAAGTTCA GTTAAATATC TTAAGGAAGC AATAAGCAAA
AACAGTGAGG CAATTCCACC AAGAATCTAT TTAATAAATT TATATCTCGA ATGTGGTATG
CATAAATATG CTGTAAAACA AGCTATAGAA TTAATACAAT TGGCTCCAAC AGGTATTAAT
TTTTATAAAC TTGCTTCATT ATATTATGAA ATAGGCGACT ATAAAGAATC TGCTGTTTTT
TCTAGAAAGG CTTTAGAGGC AGATTATGGC AAAGTAGAAA CTTATCGTTT GCTATGTAGT
TCTCTTTTAG AAGCAAATAA ACTCTCTGAA GCAAAAGATG AATTTGAAAA TGCTTTTACG
AAATACCCAG ATGACCTTGA ATTGAAGCTT AATTATTCTG CTACACTATC AGCACTAGAA
TATACTGAAA AAGCCATAGA AATTTTAACT CAAATAATTT CTAATGATCC AAACGTTGTT
TTTGCTTATA AAGCACTAGC ACGTATTTAC TATAAAGAAG CCTCTTATGA AATAGCTTTA
GAATATTCTA AAAAAGCTGT TTTTATAGAG CCAGAAGATG AGGATGCACA CTTTGTTATG
GGGTGCTCCT TATTGAATTT AGGAAAAAAC GACGAAGCTG TGGAAGAAAT ACAAAAAGTA
ATAGAGATTA ATCCAAATTT TGATAGTGCA TGGTTAATAG ATGCAGAAAA AGGCATGGAA
TATCTAGGTA ATTTAATTAC AATTTCTAAT CATATAATTG AGAGATATGA AAATGGAAAT
ATTACAATAT CAAAAGTGGG TGAATTACTA ATAAAAGATA CTTTCGATTT ATTATGTCAC
ATAAATAATG TAAAAGTAGC AGAGTCTTTG AGTTTATCTG ACGAAAAAAT AGACCAATTA
AGAAATTCAC CTATTAGTAA AAGAGATGTA CTCGTAGACG AAACGATGCT AGGTATATTA
GCTAAAACCG GAAGTCTCGA TTTATTAAGA CTAGCATTTG ATCACGTGTA TGTTATAAAA
GAACTTGAAG ATAAAATTGT TATTGGACCA TACTTAAAAG ATCATCCTTA TCGGGATGTG
AAAAATAAAC TTCAAATTAT TGATGGTGGA TGGATTGAAA GCTTAAATCC AAATGATATG
ATAGCTTTAG CTACAAAGAA AATCGTTGTT GAAAATAAAT TTAGTAAAAA CGATATTTCA
TTTATCGCTT TAGCCTTGGA TAAAGACTTT CTTTGTTTAA CAGAAGATTT GCTTCTAAGA
ATTCAACTAG AAAGTATAAA TAAACCAACT TGTGGAATTT TTGGATTTGT TAATTATGCA
GTTAGCAAGA ATATAATCAA ACAAGATGAC GCTGAAAAAA TATTTACTAA AGTTAAAAGT
GTATGTATTG TGGAGTAA
|
|---|
| Protein sequence | MEKDDSNDGS IIGGNGITAG KDVFLHNIKA PVNIGNTNNT NQNYTTYIIS ENIEEHTKSL
IDFAQFCENK REYEKALDYY EQARVKLEKS ESKILLVKVM MGEAVCHHKK GNLSRAKNLI
FEAERLDPKN PTVLANIASQ LKSENPDEAE IYAKKALEFD KNNFLAKCVI GLLEYDKGNI
KDSLRTLKQA STINPNVGYP FNCMARIYSS EKDYGNAIKY GKKAVKIESD NAIFLMELAI
DYMNIAFPEN EVCISSDFSK MLKMEYLEKA LKCLEKAKEM SESQGNNYLN CEIYTYLSRV
HLAKGEFNKS IEYCEMIINS GLDTIDIYII LGEAYGECQN YDKVIEYYEL LLKRENLTEN
HLFIVKANLA TSYFYKNRLN EAEKLFKELI DENPENINLC IQMSNVLEEN GKIEKAFSLL
EKIDKFSQKP WDFYYMMGRL YHKKDDYESS VKYLKEAISK NSEAIPPRIY LINLYLECGM
HKYAVKQAIE LIQLAPTGIN FYKLASLYYE IGDYKESAVF SRKALEADYG KVETYRLLCS
SLLEANKLSE AKDEFENAFT KYPDDLELKL NYSATLSALE YTEKAIEILT QIISNDPNVV
FAYKALARIY YKEASYEIAL EYSKKAVFIE PEDEDAHFVM GCSLLNLGKN DEAVEEIQKV
IEINPNFDSA WLIDAEKGME YLGNLITISN HIIERYENGN ITISKVGELL IKDTFDLLCH
INNVKVAESL SLSDEKIDQL RNSPISKRDV LVDETMLGIL AKTGSLDLLR LAFDHVYVIK
ELEDKIVIGP YLKDHPYRDV KNKLQIIDGG WIESLNPNDM IALATKKIVV ENKFSKNDIS
FIALALDKDF LCLTEDLLLR IQLESINKPT CGIFGFVNYA VSKNIIKQDD AEKIFTKVKS
VCIVE
|
|---|
| |