Gene Mbar_A2644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2644 
Symbol 
ID3625663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3346647 
End bp3347033 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content37% 
IMG OID637701500 
Producthypothetical protein 
Protein accessionYP_306130 
Protein GI73670115 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0396958 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAT TCATCAAAGA TAAAATAAAT CAGAGCATAA ACGATAGAGT GCAACATCAT 
TCTCGATTTT TAGAGAATTG TAATACTTAT AATTCATTTC TTAAATTAGA AAAGAAAGCA
TTTGAAGCTG GTTGCCTTTC ACGGAAACAT AAGGAACTAA TGGCTCTATC TATTTCCATT
GTTACTAAAT GTGAGCCCTG TATTGAATGG CATGTTCAAC AGGCTTGTTT AGCAGGTGCA
TCAGATAAAG AGATATATGA GACTATTGAT GTGGCCATCG AAATGGGAGG TGGACCCGCT
GCCGCTTACT CACGCTTTGC ATTGAATGCA TTGGATTTTC ACAAAGAAGA AAGTTCGGAA
AATAAGAAAT CCGGCAAACA AGCCTGA
 
Protein sequence
MDKFIKDKIN QSINDRVQHH SRFLENCNTY NSFLKLEKKA FEAGCLSRKH KELMALSISI 
VTKCEPCIEW HVQQACLAGA SDKEIYETID VAIEMGGGPA AAYSRFALNA LDFHKEESSE
NKKSGKQA