Gene Mbar_A2570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2570 
Symbol 
ID3625896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3244686 
End bp3245204 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content39% 
IMG OID637701431 
Producthypothetical protein 
Protein accessionYP_306062 
Protein GI73670047 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG4119] Predicted NTP pyrophosphohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00072063 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0208228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGTTC ATAGTAATGG CATTCTTTTA TTCAGGTTCA GGAATGAGAA ACTCGAAGTG 
ATGCTGGTTC ATCCGGGTGG GCCATTTTGG GCAAAAAAAG ACTACGGAGT GTGGTCAATA
CCCAAAGGAC TACCTGAAGG TCACGAAATT CCCCTGGATA CGGCAAAAAG AGAATTTAAA
GAAGAAACAG GTTTTGAGGT TGACGGCGAG TTTATCGATC TGGGAGAGTT AAACCAGTCT
AGAAAGAAGA TAGTTCATAC ATGGGCTCTT GAAAAAGACC TGGATATAAC AAATGTTGTA
AGTAACACAT TTCCGCTTGA GTGGCCAAAA AACTCAGGGA AAGTACATGA ATATCCCGAG
GTCGATAGAG CAGGCTGGTT TGATATCGAG CTTGCTAAGA AAAAAATACG AAAAGAACAA
ATAGGTTTTA TTGATAAGCT CATGGGCATT ATAAATTACT CTCAGAAAGA AGAGCACTTA
GACAAGGAAA AAAGATACAG GCAAACTACT CTATTTTAA
 
Protein sequence
MSVHSNGILL FRFRNEKLEV MLVHPGGPFW AKKDYGVWSI PKGLPEGHEI PLDTAKREFK 
EETGFEVDGE FIDLGELNQS RKKIVHTWAL EKDLDITNVV SNTFPLEWPK NSGKVHEYPE
VDRAGWFDIE LAKKKIRKEQ IGFIDKLMGI INYSQKEEHL DKEKRYRQTT LF