Gene Mbar_A2562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2562 
Symbol 
ID3626963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3234056 
End bp3234880 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content41% 
IMG OID637701424 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_306055 
Protein GI73670040 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.196355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACAA TTTTTGATGT GAGAAATGTA TCATATACAT ATGTTGGAAA AATAAATGCA 
TTAAATGGTG TTAGCTTCAA GGTGATGCCA GGTGAGCAAA TCTCCATAAT GGGCTCTAAC
GGCAGTGGGA AATCGACTCT ACTAACCCTT CTGGATGGAC TTATATATCC TACCTCGGGA
GAATTCTATG CTTTTGACAG TCAGATAAGC GAAGATGTTT TCGATGCTAT TAAAGATAAT
GAATTTAGGT CTTATTTCCG GAAAAGAGTA GGATTTGTCT TTCAGAACTC AGATGTACAA
CTCTTCTCAT CCACAGTTTT TGAAGAGATT GCCTTTGGAC CCTTGCAGCT CAATATGACT
CCAGAAGAAG TTAAAACCAG AGTGATAGAA GTCCTGGAGA TGATCGGAAT TACCAAGCTT
AAAGATCGAT CTCCTCATAC ACTGAGCGGA GGAGAGAAGA AAAAAGTCTG TATAGCCGCT
GTTTTGGCTA ATAACCCGGA TGTCCTTCTA CTGGATGAAC CAACCGCAGG ATTGGACCCA
AGGACTCAGC TCTGGTTGGT AGAGTTATTG CAGGAGCTTG GGAAAGCGGG AAAGACTATA
ATCACTGCCA CTCATGACCT TGAAACGGTA GAGCAAATTA GCAAAAGAGC CATAGTCATG
GGCGAAGATC ATAGAATTAT TGTGGACGGG GATGTGGAAA AGGTGCTCAA TAACAGAGAA
CTTTTACTTT CTACAAATCT TATTCATGAA CACATGCACT TTCACGGCAA GCTTGTTCAT
GAACATCTGC ATGTTCATTA TAGAGAACAT ATACATGAGC ACTAA
 
Protein sequence
METIFDVRNV SYTYVGKINA LNGVSFKVMP GEQISIMGSN GSGKSTLLTL LDGLIYPTSG 
EFYAFDSQIS EDVFDAIKDN EFRSYFRKRV GFVFQNSDVQ LFSSTVFEEI AFGPLQLNMT
PEEVKTRVIE VLEMIGITKL KDRSPHTLSG GEKKKVCIAA VLANNPDVLL LDEPTAGLDP
RTQLWLVELL QELGKAGKTI ITATHDLETV EQISKRAIVM GEDHRIIVDG DVEKVLNNRE
LLLSTNLIHE HMHFHGKLVH EHLHVHYREH IHEH