| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2531 |
|---|
| Symbol | |
|---|
| ID | 3627143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 3192820 |
|---|
| End bp | 3193776 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637701393 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_306024 |
|---|
| Protein GI | 73670009 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2512] Uncharacterized membrane-associated protein/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000779725 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.364163 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTGA GGTTTTACAT TCTGTGCACT ACTGCCTTAC TTGCTTTAGT GGTAACTCCC
ACTTCAGGGG TACCTTTCTT AGCAGACAGC AACATCACTG CAACAATCCA CGGGGCAACA
TATGCATGGG ATACCCTTGA ACCCCTAAAT GATACAGTGA TTTGTATCAA TTCCAATCCT
CCTCAATCAG TGCTGGCAAA AGATGGCAAT TATTCTTTTG AACTCGGACC TGGAGACTAC
CTTATTACAG CCAGGTATTA CCGGAACAGC ACTATTGTCT ATTCAAAAGA AACAACTTTG
AAGATTGAAG AGGAAGGAAA CTATGTCTTC GATCTCCTGC TTTATCCAGT CTCCGAAAAT
CCCGTAAAGG AAATAACCGA AAACGAAATA AGTAATGTCA ATAACGTCGA TCCCACCGAA
AAAACCAGGA CTGGCTTTTT TACTGTAAGC TACCTTCCGG TAGCCCTCAT GGTTCTTTTT
CTGCTCGGCG GAGGTTATAA ACTTTCCAGA AAGCAGAAAA AGATGAAAAT AAACAGGTAT
CAGGAAAGGA GGTTCTATAC ATCCGGGTTT CTGGCAAATA CCCTCGCTAA AATTCCTGGT
TCTGGTGTAA AGCAGGGGTC TGAAAACATC CGAGATGCAG TTCCAGCAAA AGAGTTGATA
ATAGAGCCTG GAGAACAAGG GATAGAAGTA CCAGATAATT CCAAGATTGA GCCTGCTGAT
TTAAGTAAAT TCCCTCTCAC GAAGGATCTT CCGCTTACTA AGGATCTTCG AGAAATCCTG
GATGTGATTC GGGGCCACAG GGGTAGAATT ACGCAAAAGG ATCTGCGCAG CAGGCTGGAG
TATTCCGAAG TAAAAGTCAG CCTCATGCTT TCAGAACTGG AAAAGAGAGG ACTGATTAAG
AAGTTCAAGC ACGGGCGTGA GAATATTGTG ATTTTAATAG ATGAGAATTA CAGGTGA
|
|---|
| Protein sequence | MNLRFYILCT TALLALVVTP TSGVPFLADS NITATIHGAT YAWDTLEPLN DTVICINSNP
PQSVLAKDGN YSFELGPGDY LITARYYRNS TIVYSKETTL KIEEEGNYVF DLLLYPVSEN
PVKEITENEI SNVNNVDPTE KTRTGFFTVS YLPVALMVLF LLGGGYKLSR KQKKMKINRY
QERRFYTSGF LANTLAKIPG SGVKQGSENI RDAVPAKELI IEPGEQGIEV PDNSKIEPAD
LSKFPLTKDL PLTKDLREIL DVIRGHRGRI TQKDLRSRLE YSEVKVSLML SELEKRGLIK
KFKHGRENIV ILIDENYR
|
|---|
| |