| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2526 |
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| Symbol | |
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| ID | 3625621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 3186022 |
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| End bp | 3188220 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637701388 |
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| Product | hypothetical protein |
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| Protein accession | YP_306019 |
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| Protein GI | 73670004 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0463083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAATG ATGTGATAGA AGAACTGCGG GAAATTGTAC TTGAATCTCT GCAATCTGAA
GAAGGAAATT TAAACAAAGC AGTTGACCTT GCAATAAACT TCTCAAGAGA AAATTCGATT
TCTTTCGATC AGCTATTAGA TCTGAGCACT CTTTGTGAGT CGGAAGGATC CTATGAATTG
GTATATATAT TTGCAAAGAC CGCTGCAAGC TTATCAACGG GACCTGAAAA AGCAGTTGCT
CATTATAATG CGGGAACTGC TTCTTACTTT TTGAACCTAC CTATGGAAGC AGAAGAACAG
TATAAGCTTG CTCTGGAAGC AGACCCCAAT GATGCAAGTA CACACTCAAA TTATGGAATT
CTCCTGAAAC AAATGGGGAG CTTTGGGGAT GCAGAGAAAC AATATAAACT TGCTCTGGAA
GCAGACCCCA GCCATGTCAG CACACATTCT AATTACGGAA ATCTACTTTC AGATATGGGA
TGCCATGAGG AAGCAGAAGA ACAGTATAAA CTTGCTCTTG AAGCAGATTC AAAACATGTA
AACACACACT CAAATTACGG AAATCTCCTC CAAAAAATGG GGCGACGCGA TGAAGCAGAA
GAACAGTATA AGCTTGCTCT TAAAGCAGAT CCCAATCATC TCAACACGCA TTCTAATTAC
GGAAATCTTC TTATGGATAT GGGAAGCCTT GAGGAGGCAG AAGAACAGTA TAAACTTGTT
CTAAAAGCAG ACCCCAAAAA TGTAAACACA CGTTCAAATT ACGGAAATCT ACTTTCAGAT
ATGGGAAGCC TTGAGGAAGC AGAAGTACAG TATAAACTTG TTCTGGAAGC AGACCCCAAA
AATGTAAACA CACGCTCAAA TTACGGAAAT CTACTTTTAG ATATGGAACG CCTTGAGGAA
GCAGAAGAAC AGTATAAACT TGCTCTCGAA GCAGACCCCA AAAATGTCAA CACACACTCA
AATTACGGGA ATCTACTTTC AGATGTGGGA CGCCTTGAGG AAGCAGAAGA ACAGTATAAA
CTTGCTCTTG AAGCAGATCC AAAACATGTA AACACACACT CAAATTATGG AATTCTTCTC
CAAAAAATGG GGCGCATTGA AGAGTCGAAA CAAAGATACG AAAAAGCACT CGAAATGAGG
CAAAAACTCT TCAATAAAGA CCCCGAAAAT GTAGCCTATC AGTCAGATGT AGCAATGACA
CTGAACAATT TAGGTGCCTT GCTTTCTGAT ATGGGGCACA TTGAAGAGGC AAAACAAAAG
TACGAAAAAG CACTCGAAAT GAGGCAAAAA CTCCTCCAAA AAGACCCCGA AAACGTAGCT
TATCAATCTT ACATAGGAAC GACGCTCAAC AATTTAGGTA CCTTACTTTC CGAGATGGGG
CACGTTGAAG AGGCGAAACA AAGGTACGAA AAAGCACTCG AAATGAGGCA AGAACTTCTC
CAAAAAGACC CCAAAAACGT AGCCTATCAG TCAGATGTAG CAATGACGAT CAACAATTTA
GGTGCCTTGC TTTCTGATAT GGGGCGCATT GAAGAGGCAA AACAAAAGTA CGAAAAAGCA
CTCGAAATGA GGCAAAAACT TCTCCAAAAA GACCCCGAAA ACGTAGCTTA TCAATCATAC
GTAGGGACTG CGTTCAACAA CCTGGCAGGA ATCTACAAAG ATATGGGAAA ATATGAAGAG
GCAATGAACC TGTATCATAA ATCTCTTAAT ATCCGTGAAA AATTGCTGGG GCCAGGACAT
TCTGATGTTG CAAATACTCT AAACAATATA GCTGTTCTCT ACAGAGAAAC TGGAAGATAT
GAACAGGCCC TTGAAACGTT TAATCGTGCA CTAGAAATCC TGAAGAATAT TTATGGATCA
GAGAATACTG ATTACGGATC AGAGCATCCT GATGTTGCAA ATACTCTAAA CAATATAGCT
GTTCTCTACG GAGAAACTGG AAGATATGAA CAGGCTCTTG AAACGTTTAA TCAGGCACTA
GAAATCCTGG AGAATATTTA CGGAACAGAG CATCCTGATG TTGCAATTAC TCTAAACAAC
ATGGCTATTC TCAATAGGGA AATGAGAAGA TATAAAGAAG CTCTCAAAAT GTTTAATCGT
GCACTCAAAA TCCTGGAGAG TGTTTATGGA TCAGGCCACC CTTATATTCA AAAAATTCAA
AGAAATATAA TTAGCATTAA CAAAAATACT GGTAGATAA
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| Protein sequence | MDNDVIEELR EIVLESLQSE EGNLNKAVDL AINFSRENSI SFDQLLDLST LCESEGSYEL
VYIFAKTAAS LSTGPEKAVA HYNAGTASYF LNLPMEAEEQ YKLALEADPN DASTHSNYGI
LLKQMGSFGD AEKQYKLALE ADPSHVSTHS NYGNLLSDMG CHEEAEEQYK LALEADSKHV
NTHSNYGNLL QKMGRRDEAE EQYKLALKAD PNHLNTHSNY GNLLMDMGSL EEAEEQYKLV
LKADPKNVNT RSNYGNLLSD MGSLEEAEVQ YKLVLEADPK NVNTRSNYGN LLLDMERLEE
AEEQYKLALE ADPKNVNTHS NYGNLLSDVG RLEEAEEQYK LALEADPKHV NTHSNYGILL
QKMGRIEESK QRYEKALEMR QKLFNKDPEN VAYQSDVAMT LNNLGALLSD MGHIEEAKQK
YEKALEMRQK LLQKDPENVA YQSYIGTTLN NLGTLLSEMG HVEEAKQRYE KALEMRQELL
QKDPKNVAYQ SDVAMTINNL GALLSDMGRI EEAKQKYEKA LEMRQKLLQK DPENVAYQSY
VGTAFNNLAG IYKDMGKYEE AMNLYHKSLN IREKLLGPGH SDVANTLNNI AVLYRETGRY
EQALETFNRA LEILKNIYGS ENTDYGSEHP DVANTLNNIA VLYGETGRYE QALETFNQAL
EILENIYGTE HPDVAITLNN MAILNREMRR YKEALKMFNR ALKILESVYG SGHPYIQKIQ
RNIISINKNT GR
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