| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2523 |
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| Symbol | |
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| ID | 3625618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 3182635 |
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| End bp | 3185022 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637701385 |
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| Product | hypothetical protein |
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| Protein accession | YP_306016 |
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| Protein GI | 73670001 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.184422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.460331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGATG TGGTAGAAGA ACTGCTGAGA ATTGTAGTTG AATCTCTACA ATATGAAGAA
GGAAATTTAA ATGAAGCAGT TGACCTTGCA ATAAACTTTT CAACAAAAAA TTCGATCTTT
TTTGATCAGT TATTATCTTT GAGCACTTAT TGTGGATCAG AAGGGTCCTA TGAATTAGCA
TATGTATTTG CAAAGACCAC TGCAAACTTA TCAACAGGAT CTGAAAAAGC AGTTGCTCAT
CATAATGCAG GAACAGCTTC TTACTTTTTG AACCTACCTA TGGAAGCAGA AGAACATTAT
AAACTTGCTC TGCAAGCAGA CCCCAAACAT GTCAACACAC ACTCCAATTA CGGACTTCTC
CTTTCAGATA TGGGGCGCCG TGACGAAGCA GAACAGCAGT ATAAACTTGC TCTAAAATTA
GACCCCAAAC ATGTCAACAC ACACTATAAT TACGGAATTC TTCTTTATGA TATGAGGCGC
CTCGATGAGG CAGGGGAACA ATATAAACTT GCTCTTGAAT CAGAGCCCAA ACATGTAAAA
ACACACTATA ATTACGGAAA TCTCCTTTCA GATATGGGGA GCCTCGATGA GGCAGAGGAA
CAGTATAAAC TTGCTCTTGA ATCAGAGCCC AATGATGCAG ACATACACTA TAATTACGGA
CTTCTTCTTT ATAATATGGA GAGCCTCGAT GAGGCAGAGG AACAGTATAA ACTTGCTCTT
GAATCAGAGC CCAATGATGC GAGCACACAT TCAAATTATG GAATTCTCCT TTCAGATATG
GGGCGCCGTG ACGAAGCAGA GGAACAGTAT AAACTTGCTC TTGAATCAGA TCCCAAACAT
GTCAACACAC ACTATAATTA CGGAAATCTC CTTTCAGATA TGGGGCGCCT CGATGAGGCA
GAGGAACAGT ATAAACTTGC TCTTGAATCA GATCCCAAAC ATGTAAAAAC ACACTATAAT
TACGGAAATC TCCTTTCAGA TATGGGGCGT CTCGATGAGG CAGAGGAACA GTATAAACTT
GCTCTTGAAT CAGATCCCAA TGATGCGAGC ATACATTCAA ATTACGGAAT TCTCCTTTCA
GATATGGGCC GCCATGAGGA AGCAGAAGAA CAGTATAAAC TTGCTCTGGA AACAGACCCC
AATGATGCAG ACATACACTA TAACTACGGA AATCTCCTGA AACGAATGGG GCGACTCGAT
GAGGTAGAAA AACAGTATAT ACTTGCTCTG GAAGCAGACC CCAAACATGT CAACACACAC
TATAATTACG GAAAGCTCCT GGAACAAATG GGGCGACTCG ATGAGGCAGA AAAACAGTAT
AAAATAGCAA TAGGTATAGA CCCCAAAATG CCAAATAGCC ACGGTGCCTA TGGCTTACTT
TTGTTTTTCC AAGACTTAGA AGAAGAAGCT ATTAAAGAAA CAGAAGTTGC ATCCCGCTTA
TGTAGAGAAA ACGGAGATAA AGTTAAGGAA CATCTATCCT TGGCATGGCT TTATGAAAAA
TTTGCAAACA AATATTATAA TTTAAAAGAC TATAAAAAGA GTGGAGAATA TGCTGAAATT
TCAGGAGACG AATATATCGA AGCAGGTAAG CAGGCAGGAG AGAGTTTTAA GGACACTTCT
TTAACTAAAG GCTATACGCT CAAAGGAAGA GCTAAAATTC GGAAGCTTGA AATTAAAACT
CCTTTTTACA AAGACATAAT TAAAAGAATC TGGAACAAGG AATCTTACGA GATTGAAAAA
TTTACGAAAA TCATTAATTG TATTAAGGAT GCGTCAATAT GCTATGAAAA AGCAGCCAAA
GCGTCTCCAA AAGATAATCA ATTATGTAAT GCTTGTTCAA TTTCAATGTC CTGTCTTTCG
GAAATGCTCG ACTATATGTT TGCAGTTATA AAGCAGAAAA AAACACCTGA GCTTGAAGAT
AAATTGAAAA ATTGGAATGA AAAGTTGTCA ATTGCCAAAG GTGCATATCA AGAGCATAGT
AAAGGAGAAC TCTTTATCGA ATCTCTATAT AAATTAATGG GATGCATTCA GAATCTGGAC
AAATATAAAA AGTATGGAAC GAGAGAGTAT GGAAGAGCTT TTGAGGAATG TCGCAAAGAA
TTAACTGAAA TAGCAAATAA TATAGAAGGT CCTATTCAGA AAATCATTGA GAATGTAACG
AAAAAAATGG ATGTATGTCG GCTCAAACAA TTACCTTATG CAGGTACTGA GACTGGATAT
ATACCTCAAC CTAATAAATT ATCTCAATTT TTGAAATGGA TTTTAGATCC AAAAAGAATA
GGAATAGGAG TATTTGGAAT CATAATTACA GTTATTGTTA ATCATTACAA TGAATATCTT
TTTTCTTTGA TCAAAAGAAC TGTAACTATG CTTCTCAGTA AAATATAA
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| Protein sequence | MDDVVEELLR IVVESLQYEE GNLNEAVDLA INFSTKNSIF FDQLLSLSTY CGSEGSYELA
YVFAKTTANL STGSEKAVAH HNAGTASYFL NLPMEAEEHY KLALQADPKH VNTHSNYGLL
LSDMGRRDEA EQQYKLALKL DPKHVNTHYN YGILLYDMRR LDEAGEQYKL ALESEPKHVK
THYNYGNLLS DMGSLDEAEE QYKLALESEP NDADIHYNYG LLLYNMESLD EAEEQYKLAL
ESEPNDASTH SNYGILLSDM GRRDEAEEQY KLALESDPKH VNTHYNYGNL LSDMGRLDEA
EEQYKLALES DPKHVKTHYN YGNLLSDMGR LDEAEEQYKL ALESDPNDAS IHSNYGILLS
DMGRHEEAEE QYKLALETDP NDADIHYNYG NLLKRMGRLD EVEKQYILAL EADPKHVNTH
YNYGKLLEQM GRLDEAEKQY KIAIGIDPKM PNSHGAYGLL LFFQDLEEEA IKETEVASRL
CRENGDKVKE HLSLAWLYEK FANKYYNLKD YKKSGEYAEI SGDEYIEAGK QAGESFKDTS
LTKGYTLKGR AKIRKLEIKT PFYKDIIKRI WNKESYEIEK FTKIINCIKD ASICYEKAAK
ASPKDNQLCN ACSISMSCLS EMLDYMFAVI KQKKTPELED KLKNWNEKLS IAKGAYQEHS
KGELFIESLY KLMGCIQNLD KYKKYGTREY GRAFEECRKE LTEIANNIEG PIQKIIENVT
KKMDVCRLKQ LPYAGTETGY IPQPNKLSQF LKWILDPKRI GIGVFGIIIT VIVNHYNEYL
FSLIKRTVTM LLSKI
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