| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2517 |
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| Symbol | |
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| ID | 3625612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 3174185 |
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| End bp | 3176509 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637701379 |
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| Product | glycogen debranching enzyme |
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| Protein accession | YP_306010 |
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| Protein GI | 73669995 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.467247 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGGAG AATTATATAC GGACCACAAA CAGAATTTAA AGGAATATCA CTATATTATC
GAAAGAGGAT ATCCACATCC TCTTGGGGCA ACGCCTGATG AAAATGGAGT AAATTTTTCT
ATTTATTCCG AACATGCAGA TTACGTTGAA CTTTTGCTTT TTGATAAGTG TGATGATCTG
AACCCTGCTC TTATCCTTTA CACAAACAGA GTTGGAGAAC TTACCCATTC TGAAAATATT
GAGAACTCAG TTAAGGTTTC CGAGGATATT GAAAATATTG AAAGCTCAGT TAAGGTTTCC
GAGGATATTG AAAATATTGA GAGCTCAGTT AAGGTTTCCG AGAATAGTGA AACCACTGAA
GCCACAAGTA TTGCCCTTAA TAAAACCTTC CACTTCTGGC ATGTATATGT GCGAGGCCTG
AAGCCTGGAG TCCACTATGC ATATCGAATA GGTGGTCCTT TTGATCCCTC CAGAGGATGC
CGTTTTGATG GAGATAAGGT CCTGATAGAT CCTTATTCTA AAGGAAACAA CAAAACACTC
TGGAACAGAG AAAAAGCCTG CATGCCAGGA GACAACCTTG CGTTTTCTAT GCGTAGCGTG
GTAATTGATA TGTCCCACTA CAAATGGGGA AATAACAGTC ACGTAACTGC AGAAAAGATA
TATGAGATGC CCGGAATGGG CGAAAAGCTC TACGGCAAAA AAAGGCTGCA AGAACTGAAT
GAAACCATCA TCTATGAGCT ACATGTAGGC GGATTCACCC GATCTCCAAC ATCAGGGGCT
ACAGCGTCCG GTACATTTTC AGGAGTAATT GACAAAATTC CATATCTCAA GGAACTTGGT
ATCACAGCTG TAGAATTAAT GCCTGTCTTT GATTTTGATG ATGCAACAAG CCTTGACGGA
AGAAAACAAT ACTGGGGCTA TGACCCTATA TGTTTTTTTG CGCCTCATAG CGGCTATTGT
GTGAATCCTG AGTATGGGGC TCATATGGAA GAATTCAGGG ACATGGTAAG AGCTTTGCAC
AAAGCTGGAA TTGAGGTAGT TCTTGATGTG GTCTTCAACC ATACAGCTGA AGGAGACAAC
CTGGGTCCGG TATTTTCTTT CAAGGGTATA GATAACAGCA TATATTATCT CCTGGAACCT
GACGAGCAAT ACTACAGCAA TTACTCGGGT TGTGGAAACA CAGTGAGCTG CAACCATCCG
ATTTCCCAAA AATTGATAGT TGATTGCTTG AAATACTGGG CAAAAGAGAT GCATGTTGAT
GGTTTTCGTT TTGATGAGGG CTCTATCCTT TCGCTGGATA CCAATGGGAA GGTTATGAAG
TATCCTCCTG TTATATGGCA GATTGAACTT GACGATGCTC TCGGATACAT AAAAGTGATT
GCTGAAGCCT GGGATGCAGC TGCACTCAAT CAGGTAGGAT ACTTCCCGGG CCCAAGGTGG
GCTGAATGGA ACGGTTATTA TCGGGATGAG ATCCGCCGCT TTGTAAGAGG AGATCCCGGG
ATTGTAAGGA GGGTTGCAAG CCGGATTGCC GGGAGCCCTG ACCTCTACCA GTCCGAATCA
AGGCTTCCGA TCAATAGTGT TAATTTCGTG ACTTGCCATG ATGGATTTAC ACTTAACGAC
CTTGTTTCGT ATAACCACAA ACATAATGAG GCTAACGGGG AAAATAACAG GGATGGAATT
GAGAATAATT TAAGCTGGAA CTGCGGGGTT GAGGGAGAGA CCGAAGACCC GGAGGTCGAA
ACCTTGCGGG AAAGACAGAT CAAAAATTTC GCTGCAATTC TGTTGCTGTC TATAGGGGTT
CCGATGATTT GCATGGGAGA TGAAGTCAGA CGCACTCAGA AAGGCAACAA CAATGCTTAT
TGCCAGGATA ATGAGACCAG CTGGTTTGAC TGGGACTTAG TAGAGAAAAA TCACGATATG
TTCCGTTTCT GGAAATTGAT GATTGATTTT CGGAAACGCC ATACTACTAT CCTTCGCCCC
CGATATTTTA CAGGCAAAGA AAACGAACGC GGGCTAAAAG ATATTTCCTG GCATGGGTGT
AAGCTCTACA GTCCAGGCTG GGATGACCCT CATGCAAGAG CCCTTTCTTT TACCATGGGG
GAACCAGGAG ATGAAGAAGA TATACATGTT CTGATGAATA TGTACTGGGA GCCTCTTGAG
TTCGAAATTC CAGAACTCAA AGGTATAAGT AGAAGCTGGT ATAGAGCAGT CGATACTTTC
CTGCCTTCTC CTCAGGAAAT TGCCGGAGCC GGAGAAGAAA CTCAGGTCAA CGGGAACAGC
TACATTGTGC AGGGTAGGAG TGTAGTTGTG CTAATTTCAA AGTGA
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| Protein sequence | MLGELYTDHK QNLKEYHYII ERGYPHPLGA TPDENGVNFS IYSEHADYVE LLLFDKCDDL
NPALILYTNR VGELTHSENI ENSVKVSEDI ENIESSVKVS EDIENIESSV KVSENSETTE
ATSIALNKTF HFWHVYVRGL KPGVHYAYRI GGPFDPSRGC RFDGDKVLID PYSKGNNKTL
WNREKACMPG DNLAFSMRSV VIDMSHYKWG NNSHVTAEKI YEMPGMGEKL YGKKRLQELN
ETIIYELHVG GFTRSPTSGA TASGTFSGVI DKIPYLKELG ITAVELMPVF DFDDATSLDG
RKQYWGYDPI CFFAPHSGYC VNPEYGAHME EFRDMVRALH KAGIEVVLDV VFNHTAEGDN
LGPVFSFKGI DNSIYYLLEP DEQYYSNYSG CGNTVSCNHP ISQKLIVDCL KYWAKEMHVD
GFRFDEGSIL SLDTNGKVMK YPPVIWQIEL DDALGYIKVI AEAWDAAALN QVGYFPGPRW
AEWNGYYRDE IRRFVRGDPG IVRRVASRIA GSPDLYQSES RLPINSVNFV TCHDGFTLND
LVSYNHKHNE ANGENNRDGI ENNLSWNCGV EGETEDPEVE TLRERQIKNF AAILLLSIGV
PMICMGDEVR RTQKGNNNAY CQDNETSWFD WDLVEKNHDM FRFWKLMIDF RKRHTTILRP
RYFTGKENER GLKDISWHGC KLYSPGWDDP HARALSFTMG EPGDEEDIHV LMNMYWEPLE
FEIPELKGIS RSWYRAVDTF LPSPQEIAGA GEETQVNGNS YIVQGRSVVV LISK
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