| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2507 |
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| Symbol | |
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| ID | 3625700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 3163332 |
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| End bp | 3164114 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637701369 |
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| Product | exosome complex RNA-binding protein Rrp42 |
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| Protein accession | YP_306000 |
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| Protein GI | 73669985 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2123] RNase PH-related exoribonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.142847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.578454 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAG TTATTGCTAC GCTTAAGAAG GACTATATTT ATAACCTTAT GATTAAGGGA
AAACGCCAGG ATGGTCGTGG ATTTAAAGAT TTCAGAGATA TCAAACTTGA AACAAATGTT
ATCCCGAAAG CCGAGGGCTC GGCAAAGGTA ACGCTGGGAG ACACCCAGGT CCTTGTAGGA
GTTAAGCTTC AGCCAGGAAC TCCTTTTCCG GATTCTCAGG ACGAAGGCGT AATTATTACT
AATCTGGAAC TCAATCCTAT TGCTTCCCCG GAATTTGAGC CAGGCCCACC CAGAGAAGAA
GCAATCGAAA TGGCAAGGGT TGTAGACAGG GGAATCAGAG AATCAGGCGC AATTGATATA
AAGAAGCTTT GCATAAGCGT TGGAGAATCC GTCTGGATTG CCTATATAGA TGTCCATGTC
CTCAATGATG ATGGAAATAT CATTGATGCA TCCAGTCTCG CTGCTATTGC GGCACTTATG
ACTACAATTG TCCCGAATGA GCAGCATGGA ATCGGTGCGG ACGTACCTCT TGCAATGAAA
GAGATGCCTG TTGGCGTGAC TCTTGCCAAG ATCGGCTCAA AGCTGATGGT GGACCCGTCA
CTGGATGAGG GAGCGGTTTG TGAGACAAAA TTAACTGTGG TCTCAAGTTC GGATGGATCC
GTCGCAGGCA TGCAAAAAAT GGGCACTGTT CCGTTCACCG AGGCTGAGGT GCTGGAAGCA
ATAGATATGG CATGTGAAAA GGCAGCTGAG ATCAGGAAAC TTTACCTGGA AGCACTGGTA
TAA
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| Protein sequence | MSEVIATLKK DYIYNLMIKG KRQDGRGFKD FRDIKLETNV IPKAEGSAKV TLGDTQVLVG
VKLQPGTPFP DSQDEGVIIT NLELNPIASP EFEPGPPREE AIEMARVVDR GIRESGAIDI
KKLCISVGES VWIAYIDVHV LNDDGNIIDA SSLAAIAALM TTIVPNEQHG IGADVPLAMK
EMPVGVTLAK IGSKLMVDPS LDEGAVCETK LTVVSSSDGS VAGMQKMGTV PFTEAEVLEA
IDMACEKAAE IRKLYLEALV
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