Gene Mbar_A2500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2500 
Symbol 
ID3625693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3156824 
End bp3157267 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content48% 
IMG OID637701362 
Producthypothetical protein 
Protein accessionYP_305993 
Protein GI73669978 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1325] Predicted exosome subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0500809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCATC ACATAATACT GCGTGTGATC GCCCACGCAA CCGAAGACGT AACCAGAGTC 
CGTGAGGCTC TGGACTTTTT TTTATCCGGT GCCGGCGTTC GGGAAGATGG CAAACTGATT
GAAGAACTCC AGGCTGAAGG GCACCATGGA AATCCCATTA CTATTCTGAG CGTACAGCTT
AAAAGAAAGG CAGACTGTCT GAATTTTGCA CGCTTTATTC GGGAGGGATT TTCCGAAGAA
GACGTAGCAA AGCTTAGGGA AGAAATGCCC GAGAGGCTGG ACGATGATCA GGTCTTTCAT
CTCCGCTTTG ACAAGCAGGC TGCATACCTG CAGCAGGTGA GGCTGACTGA TTCCTCGGAT
GCGATTATTG CAAAAGTCAA GATCGAGACT TATCCGAAAA ATAGGGAAAA AGCTGGAGCT
ATTGTGGAGG AATTGTTTGG GTAA
 
Protein sequence
MIHHIILRVI AHATEDVTRV REALDFFLSG AGVREDGKLI EELQAEGHHG NPITILSVQL 
KRKADCLNFA RFIREGFSEE DVAKLREEMP ERLDDDQVFH LRFDKQAAYL QQVRLTDSSD
AIIAKVKIET YPKNREKAGA IVEELFG