Gene Mbar_A2454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2454 
Symbol 
ID3627969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3099258 
End bp3099605 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content42% 
IMG OID637701319 
Producthypothetical protein 
Protein accessionYP_305950 
Protein GI73669935 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0137937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.425603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAGACC ATAAAACAGT AACAGAGAGT ATAGAAAAGA AAATGGGATT TAAACCTCAG 
ATCTTAGAAA CACTTGAGGA ACTTGATCCT GAGTTTCTTT CAAAGTACAG ACGTTGTGAT
GGAAAATTAT TGGCTGATGG AGCTCTGCCT GCAAAAACAA AAATCCTTAT GGCTCTTGCA
GTTGTGGCAT CTAAACAGTG TGAGGCCTGT ACGGTGGCGC AGATGAAAAG TGCTCTTAAT
CATGGAGTCA CTAAGGAAGA AATCATGGAA GCCATGGAAG TTATCTTTAT CACCTCAGGA
GCTCCGGCTG TTGCTGCTTG CCGAGAAGCC CTGAAATTAT TGAAATAA
 
Protein sequence
MADHKTVTES IEKKMGFKPQ ILETLEELDP EFLSKYRRCD GKLLADGALP AKTKILMALA 
VVASKQCEAC TVAQMKSALN HGVTKEEIME AMEVIFITSG APAVAACREA LKLLK