Gene Mbar_A2420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2420 
Symbol 
ID3625461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3055845 
End bp3058343 
Gene Length2499 bp 
Protein Length832 aa 
Translation table11 
GC content38% 
IMG OID637701288 
Productphosphorylase 
Protein accessionYP_305920 
Protein GI73669905 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.562102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.19796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGATA AACAGCAGGC ATGGAATGAT TTAATTAGAC TGACTAATGA TGAAGACAAA 
TCTTTGAGAT ATAGGGCTGC CTCTGCTCTT GGTTCTGCGT TTTCTCAAGT ACCAGATAAA
CAAAAAGTAT GGAATGATTT AATTAGACTA ATGAATGATG AAGATGAGTC TGTGAGGTAT
AGGGCTGCCT CTGCTCTTGG TTCTGCGTTT TCTCAAGTAC CAGATAAACA ACAGTCTTGG
AATGACTTAC TTAGACTGAC TAAAGAAAAA GATACTCTTG CGAGGTCTTG GGTTGCCCAC
GCTCTTGGTT TTGCGTTCTC ACAAGTGCCA GATAAACAAC AAGCTTCGGA TGACTTACAT
AGACTGACCA ATGATGAGGA CATTCTTGTA AAGTCTAATG CTGTTCACGC TCTTGGTTTT
GCGTTTTCTC ATGTATCAGA TAAACAACAA GCTTCGGATG ATTTACATAG ACTGACCAAT
GATGGAGACA TTTTTCTAAG ATATAGTGCT GTCACTGCGA TTGGTTTTGC GTTTTCTCAT
GTGCCAGATA AACAACGGGC ATGGAATGAT TTACATAAAC TAACCAATGA TGAAAGCAGG
TATGTGCGAT CTTGGGTTAC TGCTGCTATT GGTCGTGCGT TCTCTCATGT GCCAGATAAG
CAACAGGCAT GGAATGATTT ACTTAGACTG ATGAATGATG AAGACAGTGA TGTGAGGTCT
AGTGCTGGCG AAGCTCTTTG TTCTGTGTCT TTTGACATGC TAGATAAACA AAAGGCATGG
AATGATTTAT ATAAACTGAC TAATCATGAA GACAGTTCTG CTAGGTCTTG GGCTGTCTGT
GCTCTTGATT CTGCGTTCTC ACAAGTGCCA GATAAACAAA AGGCATGGTT TAACTTACTT
AGACTGACTA ATGATGAAGA CAGTGAAGTG ATAAGTTATG TTGCCGAAGC CCTTGGTTCT
GCGTTTCCTC AGGTGCCAGA TAAACAACAG GCATGGAATG ATTTACATAG ACTGATTAAT
GATGAAAATA GTGATGTGAG ATATAGTACT GCCGAAATTC TTTGTTCTGC GTTCTCACAA
GTGCCAGATA AACAACAGGC ATGGGATGAT TTACATAGAC TGACCAATGA TGAAGACTGT
AGTGTAAGAT ATATTGCTGC CGAAGCTCTT GGCTCTGCAT ATTCTCAAGT TCCAGATCAA
CAACAGGCAT GGAATGACTT ACATAGACTG ACTAATGATG AAGACAGTGG TGTGAGGTCT
AGTGCCGCTT CTTCTCTTGG TTCTGCTTTT CCTCAATTGC CAGATAAACA ACAGGCATGG
AATGACTTAC ATAGACTGAC TAATGATGAA GACGGTGATG TAAGAACCTT CTCAAATCAT
TCTCTTGGAA GAATTTTAAT ATTTATGGCT TCCCAGGCAG AAACAGATGA AGATTACAAA
AAAGAGCTGG AAAAGGCAAT AGAATTTTTC GAAACTGCAG CAAAGGAATC ATATGGTTGG
GATAATCCTG CTCAATTTTG CCTTCCTTTT TATCGCTCAT TCCATTCAAT AATTTTTAAA
AAACAGGAAG CTAAAGAAGA AGTAGATAGA TATTTGGCAG AAACTAAATC TGCAATTCTA
GGCTCAGAAA GCAAAAAACA GCTTCTTGAA GCTGTTGAAA ACCTCGCAGA AGCATTAAAA
GAAGTTCAGA GTATGGGAAC TATAGATTTG CCTAGGATGA AAAGTGAGAT TAATTTCTAT
AGGAAATACT GCGAGCATGC TGCGGAAATA ATGAAATGCA CTAATGAAAA AGCACCGTTC
GCGACAGAAA TTCTGAGAAA AGGGCTGCCC ATTCTAGATA GAAATCTAAA AGAGCTTATT
GAAGAGATCA AGGAAAAAGC AGAAACTGCA TGTCAGTTAT CTCAAGGAAC TGCTAACAAA
GAAATTGCAT GCACTGTTAA CAAAGAAATC CAAAAATGGG AAATCGGCAG TCCGGAAGAA
ATGAGTTGGT ATGTAAATAA TCTTATTACA GTTCTTAAAT CAAAAATTCC TCACAATACC
AAAAACAAAG AAATTCTTAA TATGATTGAG TGCATGAAGT TTGAGAAAGA CCTTACAAAG
CAATATAGAA CTCTATCTAC TGTTATTGGA TTAATACCTA CAGTTAACGT GGTTGAAGTA
GAGCCTGTCG TTGGAAATAT TAGCAAAGGA TTTCAAGAAT TAGGAACAAA AGTAGATGGT
CTTTCTCAAG AAATGAACGA GATAAGGATT AGCTTAAGCC CTGGTATAAC ACAAGAAATT
GAAATTTCTT CAGGAATTGA GATCTCAGGA ACAGGTGGAA AGCTTATAAC AACAATTCCT
TTGCAAGAAA TTTCATACGT AGAACTTAAA AAAGATTTGC AAAGGATAAA AGGAGAGAAT
ATTAGCAAAT TGTCTGAGCT TCCAAAAAGA TTAGCTAACA GAATTAAAGG ATATTTATTA
CTGAAAGACA GAGAAGATAT TATTGAGCAG TTAACTTGA
 
Protein sequence
MPDKQQAWND LIRLTNDEDK SLRYRAASAL GSAFSQVPDK QKVWNDLIRL MNDEDESVRY 
RAASALGSAF SQVPDKQQSW NDLLRLTKEK DTLARSWVAH ALGFAFSQVP DKQQASDDLH
RLTNDEDILV KSNAVHALGF AFSHVSDKQQ ASDDLHRLTN DGDIFLRYSA VTAIGFAFSH
VPDKQRAWND LHKLTNDESR YVRSWVTAAI GRAFSHVPDK QQAWNDLLRL MNDEDSDVRS
SAGEALCSVS FDMLDKQKAW NDLYKLTNHE DSSARSWAVC ALDSAFSQVP DKQKAWFNLL
RLTNDEDSEV ISYVAEALGS AFPQVPDKQQ AWNDLHRLIN DENSDVRYST AEILCSAFSQ
VPDKQQAWDD LHRLTNDEDC SVRYIAAEAL GSAYSQVPDQ QQAWNDLHRL TNDEDSGVRS
SAASSLGSAF PQLPDKQQAW NDLHRLTNDE DGDVRTFSNH SLGRILIFMA SQAETDEDYK
KELEKAIEFF ETAAKESYGW DNPAQFCLPF YRSFHSIIFK KQEAKEEVDR YLAETKSAIL
GSESKKQLLE AVENLAEALK EVQSMGTIDL PRMKSEINFY RKYCEHAAEI MKCTNEKAPF
ATEILRKGLP ILDRNLKELI EEIKEKAETA CQLSQGTANK EIACTVNKEI QKWEIGSPEE
MSWYVNNLIT VLKSKIPHNT KNKEILNMIE CMKFEKDLTK QYRTLSTVIG LIPTVNVVEV
EPVVGNISKG FQELGTKVDG LSQEMNEIRI SLSPGITQEI EISSGIEISG TGGKLITTIP
LQEISYVELK KDLQRIKGEN ISKLSELPKR LANRIKGYLL LKDREDIIEQ LT