| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2395 |
|---|
| Symbol | |
|---|
| ID | 3626350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 3029248 |
|---|
| End bp | 3030474 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637701263 |
|---|
| Product | iron(III) ABC transporter, solute-binding protein |
|---|
| Protein accession | YP_305895 |
|---|
| Protein GI | 73669880 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGTC AATCCCTGCT TATTTTGGGC CTGATTCTTC TCCTTGCGAC AGCTGTCGCA
GGATGCACAC AGTCGCCTAT GCAAACCACA GAGAACAAAA CCGTAACCGA AGACGAATAC
CGGACTGTAG TCGACAGCCG AGGAGTTGAG GTAAAGGTGC CTGTCAACAT CGAGCGGGTG
GCTACTGTCT CCGATGGCCT GGTGGAGGAA ATGATGGTTA TCCTCGGCGT TAACGATACG
CTCGTCGGCC TTGGTTCAAA AGGTCTTCAG TATGAAGGAG ATTTTTCTTA TCCGACCGAT
AATGGCACGA ATGTCACAGT GAGTGGAGGA AAACACGTTG CTCTGACTCT TTCACCCGAT
TTAAAAAATC TTCCTCTGGT AATGGATTAC GGTGTGGCTA TGAACTATGA GACTCTAGCT
TCTGTTAAAC CCGATATAGT CATCATTCGC TTAGGAGACT CTGCATTCCC ATCTAGTGAG
GACGATAATG CGCAGAAGGC CATCCAGACA ATCGAATCTC TTGGGATCCC TCTTATCGTT
CTTTATAGCC CCAATTGTTA TGAAAACTCC AGTCCAACGG CTATTTCGGA TGAAATCCAC
ATTATAGGAG AAGTATTTGG AAAAGAGGAG GAAGCTGATA AAATCGCCTC TAAACTCGAG
TCCAGGCAGG AAACGATCAG AGAAAGGACG CAGAACATTT CTGATGAGGA AAAAACTGAT
GTACTGGTGT TCGGCCTCTC TCCTATGCAC CGTACACAGA CCTCAGCCGG CATCGCCTGG
GGCCTGAAGA CAACGGAGTC ATATATGGTC GAAAATGTCG TCAATGCAAA AAACGCCTTT
CGTTCCGGTC TGGGTTCCTT TGAGGTAGTC AGCACCGAAC AGATATTAGC GATGGACCCC
GATGTCATTG TAATCGGTAC TGCGGCACAC TATGCCCCCC CTGAGGAGCT CTACGAGGCT
TCCTATTATA AAAACCTTCG TGAACTCCAG GCTGTTAAAA ATCACAGGGT CGTCTCTCTT
CCCTATACTC CCAGAAACAG TGCAAGGCGT CTGGAATATC CTATTGACCT TATGGTTATC
GCAAAGGCGG CATATCCCGA AAAATTTGGG GACATTGACC TGAACGAATG GATACTGTCA
TTTTATCAGG ATGTCTATGG CGTTGATCGT GATGTAGCTG TACGGCTTCG TTCGGCCCAG
TTGATGGACT GGTGCGTGGA AACGTAA
|
|---|
| Protein sequence | MRRQSLLILG LILLLATAVA GCTQSPMQTT ENKTVTEDEY RTVVDSRGVE VKVPVNIERV
ATVSDGLVEE MMVILGVNDT LVGLGSKGLQ YEGDFSYPTD NGTNVTVSGG KHVALTLSPD
LKNLPLVMDY GVAMNYETLA SVKPDIVIIR LGDSAFPSSE DDNAQKAIQT IESLGIPLIV
LYSPNCYENS SPTAISDEIH IIGEVFGKEE EADKIASKLE SRQETIRERT QNISDEEKTD
VLVFGLSPMH RTQTSAGIAW GLKTTESYMV ENVVNAKNAF RSGLGSFEVV STEQILAMDP
DVIVIGTAAH YAPPEELYEA SYYKNLRELQ AVKNHRVVSL PYTPRNSARR LEYPIDLMVI
AKAAYPEKFG DIDLNEWILS FYQDVYGVDR DVAVRLRSAQ LMDWCVET
|
|---|
| |