Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2335 |
Symbol | |
ID | 3625320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 2960784 |
End bp | 2961398 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637701206 |
Product | hypothetical protein |
Protein accession | YP_305838 |
Protein GI | 73669823 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0101813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0257295 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACACTG AAAGCGATAA TCTTCAGGAT TACCTCAAAA AGAGTGAAGT CATAGACTTT GATAACAAGC TGATCGTTGA GAAGTGCCTT GAATTACAGA AGGGAACCGA CGACGAAATA AGCCTGATTA AAAAGGTTTA TGAGTTTGTT CGGGATGAGA TTCATCATTC AGGCGATATA GGGGAAATGC GAGTTACTTG CAAGGCATCA GAGGTTCTGG AAGCCGGCCA CGGGATATGT TGTGCCAAAG CCCATCTGTT TGCAGCCATG CTGAGATATT TCGGGGTTCC GGCTGGGTTC TGTTATCAGA AACTTTCTTC AAGTCGGAAT GTTAACGTGA AATTCTTGCA CGGCTTAAAC GCGGTATATT TAAAAGATAT GGATAAATGG ATAAGATTGG ATGCAAGAGG CAACAAGCCA GGCCGTGATG CTCAGTTTTC CATATACGAA GAAAAGATTT CCAAGAAGGT GAATAAAGAG CTTGGGGAAG AAGATAGTCC AGTAATCTTT GCAGAGCCCA ATCCGAATGT TATTGAAATC TTAAAGACAA GTAAAGATAT GAAAGAATTA TGGGATCAAT GGGATCTTGG GCTGAGGGAT TTATTTCGTA CTTAA
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Protein sequence | MYTESDNLQD YLKKSEVIDF DNKLIVEKCL ELQKGTDDEI SLIKKVYEFV RDEIHHSGDI GEMRVTCKAS EVLEAGHGIC CAKAHLFAAM LRYFGVPAGF CYQKLSSSRN VNVKFLHGLN AVYLKDMDKW IRLDARGNKP GRDAQFSIYE EKISKKVNKE LGEEDSPVIF AEPNPNVIEI LKTSKDMKEL WDQWDLGLRD LFRT
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