| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2330 |
|---|
| Symbol | |
|---|
| ID | 3625238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 2955812 |
|---|
| End bp | 2956561 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637701202 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_305834 |
|---|
| Protein GI | 73669819 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.291215 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0289436 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAAATTG ATTATAATGA ACTGGCAAAA AAGTATGATC TAACAAGAAA AGAGAACGTG
GATACGATAA ATCGATTTTT GGAAAATCTA TCTTTTTCTG AAGAAACAAA TATACTTGAT
TTTGGGTGCG GAACTGGCAA CTTCACCTGT GCTCTGAAAC GGATAACAAA TGCTAATGTG
TACGGGGTTG AACCGGCTGA CAAGATGAGG CAAAAAGCCA TTGACAAAAA TACAGATGTC
ATTTTCGAAA AAGGCAATCA TGAAAAAATA CCTTTTATGG ATAACTTTTT CGATTTTATA
TATATGACTG ACGTAATACA CCATATACCG AATATTAATG TAATGTTTAA AGAGTTAAAT
AGAGTACTTA AACAGGGCGG CTCTCTCTGT ATTGTTACCG AATCCCATAA ACAAATAGAA
TCGAGGTTCT GGGCAAAATA TTTTCCAGCA ACCGTAAAAG TGGAAAAAAA GAGATACCCG
GATATTCCTG AAATTGTAGA AAGTGCCACT AACAATGGTT TTGTATTTTC AAAGATAGAG
ACTACAGATG CAAATCACAA GCACTCAATC TCTAAGAATT TTTTAATGCT AGTAGAAAAC
AAAGGGTATT CCATGTTTCA TTTGATAAGT AACGATGACC ATGAATGCGG TCTCGCTGAT
TTAAGAAATG ATTACAGTAA ACAGGTTAAA ATTGAGTACA GCCACGGAGA GACATTTTTG
TGGTTAAAAA AGCCATTTAA AAACTGGTAG
|
|---|
| Protein sequence | MEIDYNELAK KYDLTRKENV DTINRFLENL SFSEETNILD FGCGTGNFTC ALKRITNANV
YGVEPADKMR QKAIDKNTDV IFEKGNHEKI PFMDNFFDFI YMTDVIHHIP NINVMFKELN
RVLKQGGSLC IVTESHKQIE SRFWAKYFPA TVKVEKKRYP DIPEIVESAT NNGFVFSKIE
TTDANHKHSI SKNFLMLVEN KGYSMFHLIS NDDHECGLAD LRNDYSKQVK IEYSHGETFL
WLKKPFKNW
|
|---|
| |