Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2319 |
Symbol | |
ID | 3625227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 2942826 |
End bp | 2944112 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637701191 |
Product | hypothetical protein |
Protein accession | YP_305823 |
Protein GI | 73669808 |
COG category | [R] General function prediction only |
COG ID | [COG1571] Predicted DNA-binding protein containing a Zn-ribbon domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTATCG GAATTGATGA TACCGACTCA AACGAAGGAA TGTGCACAAC ATATCTAGGG GCTCTGCTGC TGGACGAACT TCAAGCCTAC GGAACTGTAG AGACTCGTCC ACTCCTTATA CGCCTGAATC CGACTATCCC CTACAAAACA AGAGGAAATG CTGCAGTAGC ACTGAAACTC AAGACTAACT GCCCTGAAAA AGTAATTGCT CATGTTGTGT CCAGAATAGA AGAATTTGCA CGTATGGAAT GCGAAAAAAC TAACCCTGGC ACGGTTTTTA TCCCGGAAAA AGCTTACGGA AAGCTCAAAC CCGTCCTCAG GAACTTTCTG GAGAAAGCCG TGAAGGACGT GATCGAAATA GAGGAGGCAA AAAGCCTTAT CTCGGAATCC GGGGTTCCTT CAAAGGGCTT CAAAAACGGA AGGGGACTGA TAGGCGCCCT TGCAGCATGT GGGGCTATGC TTAATCTCAA TGAATGGGAT TACACTTTCG AGTACCTGGC ATACAGGCAA AAGGAAAACT GGGGAACCCC ACGCAAGATC GAAAAGGAAA GTTTCTTTGA GGCTGATAAG AAGACGTATC CTGATACCTG GGACACCGTG GACCTTAAAA ACAGACTTGT TGTCTGTGTA CCCCACTCGG CAGATCCCGT GCTCTTCGGG ATCAGAGGGA AAAATCCAGC TGTAGTTACA AAAGCCGTAT CCCTGATCAG GGCTGAGCCT GTAGAACGTT TTGCCATATA CAGAACAAAT CAGGGTACTG ATATGCACCT GATTTCCGCA GAAAGTATTG CAGAAATAAG GGATATGCAC TCTTACACGC TTGAAGGCAC GGTCTCGGCA ATTCCAAAAA CTCTTCACGG AGGACACGTT ATTTTTCCCA TCCAGGATAA AGAGGAAAAC GAAATTGACT GCGCAGCCTT CGAACCCACA AAGAACTTCC GGCTGCTTAT AAGGAGACTC AGGCCCGGAG ATAGAATTGT AGTATCTGGA AGTGTAAATT CCAGAACTCT CAACATCGAA AAAATAGAGA TAAAAAATCT CGTTCCTCTT TATAGGGAAG AAAACCCGGT ATGTCCGACC TGCGGAAAAC ATATGAAATC ATCAGGCCAA AACCAGGGTT TCCGTTGTAA AAAATGCGGA ACTCAAGCTA CCTCAAAAAT CCTGTGTGAA ACAAAAAGAA ATCTTACAGA GGGATTATAT GAAGTCCCGC CCTGCGCCCG TCGGCATCTT GCAAAACCTC TTGTAAGGGA ACAGAAATCT GATATAGAGA TCCACCCTGC CCGCTAA
|
Protein sequence | MIIGIDDTDS NEGMCTTYLG ALLLDELQAY GTVETRPLLI RLNPTIPYKT RGNAAVALKL KTNCPEKVIA HVVSRIEEFA RMECEKTNPG TVFIPEKAYG KLKPVLRNFL EKAVKDVIEI EEAKSLISES GVPSKGFKNG RGLIGALAAC GAMLNLNEWD YTFEYLAYRQ KENWGTPRKI EKESFFEADK KTYPDTWDTV DLKNRLVVCV PHSADPVLFG IRGKNPAVVT KAVSLIRAEP VERFAIYRTN QGTDMHLISA ESIAEIRDMH SYTLEGTVSA IPKTLHGGHV IFPIQDKEEN EIDCAAFEPT KNFRLLIRRL RPGDRIVVSG SVNSRTLNIE KIEIKNLVPL YREENPVCPT CGKHMKSSGQ NQGFRCKKCG TQATSKILCE TKRNLTEGLY EVPPCARRHL AKPLVREQKS DIEIHPAR
|
| |