| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2299 |
|---|
| Symbol | |
|---|
| ID | 3625169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 2915230 |
|---|
| End bp | 2915874 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637701171 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_305803 |
|---|
| Protein GI | 73669788 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
|---|
| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.770336 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAAG ACAATGTAAA CGAACTTTTA AAAGTGCTAC CCCCTGATGT AACACTTGTC
GCCGCAGTAA AATACGCGTC AAAAATACAA ATAGACGAAG CCATAAAAGT AGGTGTTACA
GACATCGGCT TCAACCATTA TCAACAGATG AAAGATTTGG CCCCATATTA TCCACCTGAG
ATAAAAACCC ACTTCATCGG CACACTTCAG TTAAACAAGG CAAAAAAAGT AGTAAACCTA
AATCCCTACT TGATAGAAAG TGTTGATTCA TACGAACTTG CCGAAAAGAT AAATAATGCA
GCAAAAGAAA ATAAAAGAAT TCAGAAAATC CTCATACAAG TGAAGACCGA CGAAAAAAAA
CACACCGGAT TAGAGCCCGG TGACCTCTTA AAGCTTCTAG ACCAAATCTC AACCCTCGAA
TACTTAAGTT TTGAAGGCCT GATGACAATC CCGCCAAAAA ACGAAGACCC TGAAGATTCA
AGAAAATATT TCAAAGAATT AAAAGACTTA AAAGACAAAG CAGAGAAGCA CTTAAAAAAA
CATCTTCAGT ATCTCTCAAT GGGAATGACA GACGATTATC AAATAGCAAT AGAAGAAGGT
GCAAGCATCG TCCGCATCGG CAGAAAAATT TTCAAAGTAG TATGA
|
|---|
| Protein sequence | MIEDNVNELL KVLPPDVTLV AAVKYASKIQ IDEAIKVGVT DIGFNHYQQM KDLAPYYPPE
IKTHFIGTLQ LNKAKKVVNL NPYLIESVDS YELAEKINNA AKENKRIQKI LIQVKTDEKK
HTGLEPGDLL KLLDQISTLE YLSFEGLMTI PPKNEDPEDS RKYFKELKDL KDKAEKHLKK
HLQYLSMGMT DDYQIAIEEG ASIVRIGRKI FKVV
|
|---|
| |