Gene Mbar_A2293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2293 
Symbol 
ID3625145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2904381 
End bp2905049 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content42% 
IMG OID637701165 
Producthypothetical protein 
Protein accessionYP_305797 
Protein GI73669782 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.661266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0651715 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG AACGTCTATT ACTTGTGCAG AAAAATGAAA AGACAATTCC AGCTGTGAAA 
ATCGTTCCTT TGCAGCCAGT TGGCAGCGTG GTTTTAGTGC ACGGTTACGG AGGCTGTAAA
GAGGAAGATC TGGGATTGGC TTGGCGCATA GCCGAAAAAG GTCTGGTAGT ATGCGCTATA
GACCTATGCG GTCATGGCGA GAATCTCTCG TTCTTGCACA AAGATATGCT GGTCGAGCTG
GAAACAGCTA TAGAACACTG TCGGCAATAC GGGAAAGTAG CTACCATCGG CCATTCACTT
GGAGGACGTC TGTCACTTTT AAGTAGTGCT GATTTTGTTA TTGGTATATC ACCTGCTCTA
AATACAAAAT ATAGTGAAAC AACCTGCGAT AATCTTGAAA CTTTCAGAAG CTATCGTGTG
AGAGAAAAAT CCTTCAATTC TTTTATAAAA ATTATAGGCC AACTGCCAGT ATGGCAGCCC
GATACAGCCC AGCCAACTTT AATTCTATTT GGAACCCGGG ATATTCCAGA AATCGTTCAA
GACTGTCGGA AACTCCAGGC TAAGGGATTT CAGGTGCAGG AAATCGATGC GGCTTTTCAT
AACGATATTT ATTTGCATGA AGAAACGTTT AGAGCAATAA ATAAACAGTT AAAACTGTGG
TTTAAGTGA
 
Protein sequence
MKIERLLLVQ KNEKTIPAVK IVPLQPVGSV VLVHGYGGCK EEDLGLAWRI AEKGLVVCAI 
DLCGHGENLS FLHKDMLVEL ETAIEHCRQY GKVATIGHSL GGRLSLLSSA DFVIGISPAL
NTKYSETTCD NLETFRSYRV REKSFNSFIK IIGQLPVWQP DTAQPTLILF GTRDIPEIVQ
DCRKLQAKGF QVQEIDAAFH NDIYLHEETF RAINKQLKLW FK