Gene Mbar_A2138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2138 
Symbol 
ID3626092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2699614 
End bp2700903 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content33% 
IMG OID637701014 
Productamylovoran biosynthesis AmsK 
Protein accessionYP_305647 
Protein GI73669632 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0369934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0657655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAG ATACAGCAAA AAAAGAGACA ATTCTTGTTT TAATCACGTT TTCATATCCC 
TATGGGGCAA TTAGAGAATC ATTTTTAGAT CCTGAAATCT CATGTCTATG TTCATATTTT
AATAAAATAA TTCTCGTGCC TCAATATCTC CCCGATGCCA CTGAAAAGAT AGCTCGGAAT
CTCCCTAAAG TATGTGTACT AGATGATTCT CTGATCATAT ATTCCAAAAT TGGGAAGATT
AGGAGTGTAT TAATGAAGAT ATTTTTATGT TTGAGATCAA AGTTATTTTA TACTGAAATT
ATTAAAAAAC CAGCAATCAT CACAAATATT AAATCCTTTA AATTGTTGGG AGAATTTATA
TCTGATGCCT TTATCATAAA AAAATGGGCT TCAAACTGTA TAAAAAAGCA TGATTTTGCT
CCACAAAATA CTATATTTTA TACTTACTGG CTCAGTGCTT CGACCTTAGG TCTCGGTTTA
TTAAAAGAAG AGTATCCAGA CATTGTTGTG ATTTCAAGAG CACACAGGGG CGATTTGTAT
GAAGATCAGT ATAGCTCAGC ACATATTACC TTAAGGAATG AAACATTTTC ATTAATATCA
AAAGTATTCT TGATATCAAA TAGTGGGAAG GAGTATCTAG AAAAAAAATA TCCAACTTAT
TTAGAAAAAT ATCAAACTAT AAGGTTAGGG GTAACAGATT CACATTTTAT TACTTCTCCA
TCTGTAGATG GAATTTTCAG AATAGTATCA TGTTCCTATA TTGTGCCAGT TAAAAGATTG
CACCTGCTAA TAAATGGATT AAAAGAGTTT TGTATTCTTC GACCAAGCAA GAGAATTGAA
TGGACACATA TCGGCTATGG TCCACTTGAA CAGAGCATTA AAAAACTAGC ATCAGAAGTT
TTACCTGAAA ATGTAAAATA TAATTTTACA GGATTTTTAC CAGATAAAGG AGTGATCGAA
TATTATCGGC AACACAATGT AGATGTTTTT ATTAATGTCA GTGCGTCAGA AGGCATACCG
GTATCAATAA TGGAGGCCCA GAGCTGCGGT ATACCAGTGA TAGCTACCGA TGTTGGCGGG
ACCCACGAAA TAGTATCGGA TGAAGTTGGA TTGTTGCTTG ATAGTGATCC GACCCCTATG
GATATCGCAG ATGCAATATT GAAATTTATT GATAATCCAA ATCAAATTGC TGATAAAAAG
AGAAAAAGCA AAGAAAATTG GAGGTTAAAT TATAATGCTG AAGTTAATCA CAATTTTTTT
GCTCAAGAGA TTGCAAATTT GCGGAATTGA
 
Protein sequence
MRKDTAKKET ILVLITFSYP YGAIRESFLD PEISCLCSYF NKIILVPQYL PDATEKIARN 
LPKVCVLDDS LIIYSKIGKI RSVLMKIFLC LRSKLFYTEI IKKPAIITNI KSFKLLGEFI
SDAFIIKKWA SNCIKKHDFA PQNTIFYTYW LSASTLGLGL LKEEYPDIVV ISRAHRGDLY
EDQYSSAHIT LRNETFSLIS KVFLISNSGK EYLEKKYPTY LEKYQTIRLG VTDSHFITSP
SVDGIFRIVS CSYIVPVKRL HLLINGLKEF CILRPSKRIE WTHIGYGPLE QSIKKLASEV
LPENVKYNFT GFLPDKGVIE YYRQHNVDVF INVSASEGIP VSIMEAQSCG IPVIATDVGG
THEIVSDEVG LLLDSDPTPM DIADAILKFI DNPNQIADKK RKSKENWRLN YNAEVNHNFF
AQEIANLRN